RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SELENONQ9NZV5 590 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 B3GAT1Q9P2W7 334 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 MGAT4BQ9UQ53 548 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 AMDHD2Q9Y303 409 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 ARID1AO14497 2285 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 A0A087WUJ7 227 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 AIM2O14862 343 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 SMAD7O15105 426 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 UPK3AO75631 287 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 CD8AP01732 235 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 VIMP08670 466 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 ZNF43P17038 809 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 GZMMP51124 257 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 ARFIP2P53365 341 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 CLDN17P56750 224 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 GUCY1A3Q02108 690 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 TRMT5Q32P41 509 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 RANBP3LQ86VV4 465 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 OXGR1Q96P68 337 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 ALKBH3Q96Q83 286 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 ARHGDIGQ99819 225 aa18.79■□□□□ 0.6
PPP4R1-228ENST00000584074 E7EQL1 145 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 ZNF587BE7ETH6 402 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 PCGF2P35227 344 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 PRPS1P60891 318 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 KLF10Q13118 480 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 CYLC2Q14093 348 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 NPTX1Q15818 432 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 NRF1Q16656 503 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 NANOGP8Q6NSW7 305 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 CLEC9AQ6UXN8 241 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 H1FNTQ75WM6 255 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 ABHD12BQ7Z5M8 362 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 RBM45Q8IUH3 476 aaKnown RBP18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 TAMM41Q96BW9 452 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 MCHR1Q99705 422 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 TRAF4Q9BUZ4 470 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 EVA1AQ9H8M9 152 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 NANOGQ9H9S0 305 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 SAR1AQ9NR31 198 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 POU2F3Q9UKI9 436 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 B3GALT5Q9Y2C3 310 aa18.78■□□□□ 0.6
PPP4R1-228ENST00000584074 ZNF432O94892 652 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 C8BP07358 591 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 CD247P20963 164 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 IL1RL1Q01638 556 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 LTBQ06643 244 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 C1DQ13901 141 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 RABL3Q5HYI8 236 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 B3GLCTQ6Y288 498 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 PATL1Q86TB9 770 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 DTX2Q86UW9 622 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC30A8Q8IWU4 369 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 OR4D11Q8NGI4 311 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 OR6T1Q8NGN1 323 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 OR1K1Q8NGR3 316 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 TRMT61AQ96FX7 289 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 BOD1Q96IK1 185 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 FAIMQ9NVQ4 179 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 RCE1Q9Y256 329 aa18.77■□□□□ 0.6
PPP4R1-228ENST00000584074 USF3Q68DE3 2245 aa18.77■□□□□ 0.59
PPP4R1-228ENST00000584074 ZANQ9Y493 2812 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 CADP27708 2225 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 OR6C65A6NJZ3 312 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 LRRN3E7EW58 273 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 FXYD1O00168 92 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 FMO6PO60774 539 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 LY6G6DO95868 133 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 HPRP00739 348 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 BGLAPP02818 100 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 HOXB4P17483 251 aaPredicted RBP18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 VMACQ2NL98 169 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 SWT1Q5T5J6 900 aaKnown RBP18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 KLHL24Q6TFL4 600 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 VANGL1Q8TAA9 524 aaPredicted RBP18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 BCL2L2Q92843 193 aaPredicted RBP18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 LRRC58Q96CX6 371 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 POM121Q96HA1 1249 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 MOGAT1Q96PD6 335 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 EPYCQ99645 322 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 LINC00470Q9BZP3 86 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 ALG2Q9H553 416 aa18.76■□□□□ 0.59
PPP4R1-228ENST00000584074 LOC102725191A0A1B0GVB3 256 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 CPSF4LA6NMK7 179 aaKnown RBP18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 MS4A18H0YCH9 400 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 MRASO14807 208 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 TRAF3IP2O43734 574 aaPredicted RBP18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 NDUFS7O75251 213 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 WNT11O96014 354 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 NQO1P15559 274 aaKnown RBP18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 CRYBA2P53672 197 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 ROR2Q01974 943 aaKnown RBP18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 MS4A18Q3C1V0 323 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 TBRG1Q3YBR2 411 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 MMEL1Q495T6 779 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 ENTPD8Q5MY95 495 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 INTS11Q5TA45 600 aaKnown RBP18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 AGAP6Q5VW22 663 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 REP15Q6BDI9 236 aa18.75■□□□□ 0.59
PPP4R1-228ENST00000584074 HMBOX1Q6NT76 420 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms