RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 OXGR1Q96P68 337 aa17.13■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF587Q96SQ5 575 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-220ENST00000581707 AMBRA1Q9C0C7 1298 aa17.13■□□□□ 0.33
SREBF1-220ENST00000581707 USF3Q68DE3 2245 aa17.13■□□□□ 0.33
SREBF1-220ENST00000581707 OR6C65A6NJZ3 312 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 SLC22A2O15244 555 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 TMCC2O75069 709 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 CBLP22681 906 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF83P51522 516 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 CLDN17P56750 224 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 C1DQ13901 141 aaKnown RBP17.12■□□□□ 0.33
SREBF1-220ENST00000581707 NPTX1Q15818 432 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 Q5PR19 223 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 KLHL17Q6TDP4 642 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 C17orf78Q8N4C9 275 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 WDR31Q8NA23 367 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 KBTBD8Q8NFY9 601 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 OR6S1Q8NH40 331 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 VANGL1Q8TAA9 524 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-220ENST00000581707 RASSF5Q8WWW0 418 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 TMEM43Q9BTV4 400 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 GSX2Q9BZM3 304 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 CXorf56Q9H5V9 222 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 SLC17A5Q9NRA2 495 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 ARMCX1Q9P291 453 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 B3GAT1Q9P2W7 334 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 LAMP3Q9UQV4 416 aa17.12■□□□□ 0.33
SREBF1-220ENST00000581707 HEATR1Q9H583 2144 aaKnown RBP17.12■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF587BE7ETH6 402 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 ABCD4O14678 606 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 FOSL1P15407 271 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 CDH2P19022 906 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-220ENST00000581707 PTNP21246 168 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 PTH2RP49190 550 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 IL1RL1Q01638 556 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 LGALS3BPQ08380 585 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 ENTPD8Q5MY95 495 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 ERICH5Q6P6B1 374 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 PRSS57Q6UWY2 283 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 TMEM108Q6UXF1 575 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 RBM45Q8IUH3 476 aaKnown RBP17.11■□□□□ 0.33
SREBF1-220ENST00000581707 OR4D11Q8NGI4 311 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 SMAP2Q8WU79 429 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-220ENST00000581707 RADILQ96JH8 1075 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF583Q96ND8 569 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 DLL4Q9NR61 685 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 MGAT4BQ9UQ53 548 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 AMDHD2Q9Y303 409 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 CORINQ9Y5Q5 1042 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 PLCE1Q9P212 2302 aa17.11■□□□□ 0.33
SREBF1-220ENST00000581707 LOC102725191A0A1B0GVB3 256 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 CPSF4LA6NMK7 179 aaKnown RBP17.1■□□□□ 0.33
SREBF1-220ENST00000581707 SHISA9B4DS77 424 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 M0R1B8 84 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 CHP2O43745 196 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 BGLAPP02818 100 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 NQO1P15559 274 aaKnown RBP17.1■□□□□ 0.33
SREBF1-220ENST00000581707 PTAFRP25105 342 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 CRYBA2P53672 197 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 LTBQ06643 244 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 VEZF1Q14119 521 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 C1QTNF12Q5T7M4 302 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 LINC00114Q6XXX2 140 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 C10orf53Q8N6V4 93 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 POU5F2Q8N7G0 328 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 ADPRHL1Q8NDY3 354 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 ADAMTS16Q8TE57 1224 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 C1QTNF6Q9BXI9 259 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 ASPNQ9BXN1 380 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF701Q9NV72 531 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-220ENST00000581707 CISD1Q9NZ45 108 aaKnown RBP17.1■□□□□ 0.33
SREBF1-220ENST00000581707 USP22Q9UPT9 525 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 RCE1Q9Y256 329 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 C2CD3Q4AC94 2353 aa17.1■□□□□ 0.33
SREBF1-220ENST00000581707 TRAPPC13A5PLN9 417 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 MS4A18H0YCH9 400 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 CCDC22O60826 627 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 UPK3AO75631 287 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 ZNF432O94892 652 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 SOD3P08294 240 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 PAX1P15863 534 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 CD40P25942 277 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 PRPS1P60891 318 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 RPS4XP62701 263 aaKnown RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 MS4A18Q3C1V0 323 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 KLHL24Q6TFL4 600 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 YTHDF3Q7Z739 585 aaKnown RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 SCAIQ8N9R8 606 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 RP9Q8TA86 221 aaKnown RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 PROX1Q92786 737 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 RCN3Q96D15 328 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 SLC41A3Q96GZ6 507 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 BOD1Q96IK1 185 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 MOGAT1Q96PD6 335 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 ALKBH3Q96Q83 286 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 LINC00470Q9BZP3 86 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 PCDHAC1Q9H158 963 aa17.09■□□□□ 0.33
SREBF1-220ENST00000581707 MAGED1Q9Y5V3 778 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-220ENST00000581707 ALPK2Q86TB3 2170 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms