RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 OR5M9Q8NGP3 310 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF417Q8TAU3 575 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 GNPDA2Q8TDQ7 276 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 SDCCAG3Q96C92 435 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 GMPPAQ96IJ6 420 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF845Q96IR2 970 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-203ENST00000580986 DMRTA2Q96SC8 542 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 GPX7Q96SL4 187 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF587Q96SQ5 575 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-203ENST00000580986 NDEL1Q9GZM8 345 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 TNFRSF10DQ9UBN6 386 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 ENOPH1Q9UHY7 261 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 SIGLEC7Q9Y286 467 aa9.29□□□□□ -0.92
CCDC47-203ENST00000580986 RRP15Q9Y3B9 282 aaKnown RBP9.29□□□□□ -0.92
CCDC47-203ENST00000580986 FAM181BA6NEQ2 426 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 EFCAB9A8MZ26 197 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 KPNA4O00629 521 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PLPP3O14495 311 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 CDC42EP2O14613 210 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 GPR171O14626 319 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 CASQ2O14958 399 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PIP5K1CO60331 668 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 SS18L1O75177 396 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 RCBTB2O95199 551 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 IL18BPO95998 194 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OPN1LWP04000 364 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 HIST1H2ABP04908 130 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 SAGP10523 405 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 ANPEPP15144 967 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF23P17027 643 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 MAKP20794 623 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 CEACAM8P31997 349 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 IST1P53990 364 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PPP2R2BQ00005 443 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 FHL1Q13642 323 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 SLC17A1Q14916 467 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 ZBED5Q49AG3 693 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OTUD3Q5T2D3 398 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF585AQ6P3V2 769 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 RASSF6Q6ZTQ3 369 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 HIST3H2AQ7L7L0 130 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 NANOGNBQ7Z5D8 188 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PXKQ7Z7A4 578 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 TMEM179BQ7Z7N9 219 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OAFQ86UD1 273 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 P3H2Q8IVL5 708 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 AQP11Q8NBQ7 271 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OR9Q2Q8NGE9 314 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 FNDC9Q8TBE3 224 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 HIST1H2ACQ93077 130 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 FAM46AQ96IP4 442 aaKnown RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OXGR1Q96P68 337 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 FEVQ99581 238 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 TTYH2Q9BSA4 534 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 C9orf16Q9BUW7 83 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 RNPEPL1Q9HAU8 725 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 IL20Q9NYY1 176 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 USE1Q9NZ43 259 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 EMC3Q9P0I2 261 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PDP1Q9P0J1 537 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-203ENST00000580986 B3GAT1Q9P2W7 334 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 OAZ3Q9UMX2 235 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 MEMO1Q9Y316 297 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 NOX1Q9Y5S8 564 aa9.28□□□□□ -0.92
CCDC47-203ENST00000580986 PTP4A3O75365 173 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 AQP8O94778 261 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 AKR7A3O95154 331 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TGM6O95932 706 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 HPRP00739 348 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 GASTP01350 101 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 IGHMP01871 453 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 APEHP13798 732 aaKnown RBP9.27□□□□□ -0.93
CCDC47-203ENST00000580986 GPR4P46093 362 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 RASGEF1BQ0VAM2 473 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 PMS2P3Q13401 168 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 KDM4DQ6B0I6 523 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TMEM225Q6GV28 225 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 NHLRC1Q6VVB1 395 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 RPTNQ6XPR3 784 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 ZNF620Q6ZNG0 422 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 SEM1Q6ZVN7 128 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 EPHX4Q8IUS5 362 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TMEM99Q8N816 258 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TMEM45BQ96B21 275 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 SLC25A36Q96CQ1 311 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 RDH12Q96NR8 316 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TRIB1Q96RU8 372 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 GPA33Q99795 319 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 RBM4BQ9BQ04 359 aaKnown RBP9.27□□□□□ -0.93
CCDC47-203ENST00000580986 RBM4Q9BWF3 364 aaKnown RBP9.27□□□□□ -0.93
CCDC47-203ENST00000580986 PRRG4Q9BZD6 226 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 TAS2R5Q9NYW4 299 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 KLHL13Q9P2N7 655 aa9.27□□□□□ -0.93
CCDC47-203ENST00000580986 ZNF629Q9UEG4 869 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms