RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SUCLG1P53597 346 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HCCSP53701 268 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RRADP55042 308 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GP2P55259 537 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CDH11P55287 796 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GABARAPL2P60520 117 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PLGLB1Q02325 96 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ST3GAL4Q11206 333 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SELENBP1Q13228 472 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 KRR1Q13601 381 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IRF3Q14653 427 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ACKR1Q16570 336 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SGCBQ16585 318 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OCLNQ16625 522 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MS4A18Q3C1V0 323 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 KLHL12Q53G59 568 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF766Q5HY98 468 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 C3orf33Q6P1S2 294 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NIPAL3Q6P499 406 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LEG1Q6P5S2 330 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DPY19L2P2Q6ZN68 376 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MAMDC2Q7Z304 686 aaPredicted RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GGNQ86UU5 652 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 UBQLNLQ8IYU4 475 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DND1Q8IYX4 353 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 EXD3Q8N9H8 876 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NPEPL1Q8NDH3 523 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF248Q8NDW4 579 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ANKK1Q8NFD2 765 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR52I1Q8NGK6 324 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR8J1Q8NGP2 316 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SNIP1Q8TAD8 396 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 FAR1Q8WVX9 515 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LIPHQ8WWY8 451 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MUL1Q969V5 352 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF775Q96BV0 537 aaPredicted RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DDIT4LQ96D03 193 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZMYND19Q96E35 227 aaPredicted RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF845Q96IR2 970 aaPredicted RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PLEKHA8Q96JA3 519 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SFXN2Q96NB2 322 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SLC38A2Q96QD8 506 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR5M11Q96RB7 305 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GPX7Q96SL4 187 aaPredicted RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DDOQ99489 341 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TBX5Q99593 518 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 FAM173AQ9BQD7 235 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 COPS4Q9BT78 406 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR2B2Q9GZK3 357 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DEFB127Q9H1M4 99 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PTGES2Q9H7Z7 377 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CHST11Q9NPF2 352 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NRIP3Q9NQ35 241 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CMC2Q9NRP2 79 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PLCXD1Q9NUJ7 323 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MED29Q9NX70 200 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 B3GAT1Q9P2W7 334 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ENOPH1Q9UHY7 261 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TEKT2Q9UIF3 430 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZMIZ1Q9ULJ6 1067 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SEC16AO15027 2179 aa5.52□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PTPRZ1P23471 2315 aaPredicted RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TVP23AA6NH52 213 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RIIAD1A6NNX1 92 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PRR32B1ATL7 298 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 C1QTNF9BB2RNN3 333 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 H3BSA7 217 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TAF4O00268 1085 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 EIF1AYO14602 144 aaKnown RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MAGEB4O15481 346 aaPredicted RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PRODHO43272 600 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF208O43345 1280 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CXCL13O43927 109 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SELENOFO60613 162 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CBR3O75828 277 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CEACAM4O75871 244 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GLSO94925 669 aaPredicted RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IGF2P01344 180 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TFP02787 698 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HIST1H2ABP04908 130 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HMGN1P05114 100 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 C1QTNF9P0C862 333 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IFNGR1P15260 489 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SPI1P17947 270 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 POU3F2P20265 443 aaPredicted RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ENPP1P22413 925 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SLC2A5P22732 501 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NR4A1P22736 598 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GSTT1P30711 240 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NAA10P41227 235 aaPredicted RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 DIO1P49895 249 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ETV1P50549 477 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TNFSF10P50591 281 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SOX8P57073 446 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CXCR4P61073 352 aa5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RPS7P62081 194 aaKnown RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PPIAP62937 165 aaKnown RBP5.51□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HSF1Q00613 529 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms