RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	CD247	P20963	164 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CD40	P25942	277 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CRYBA2	P53672	197 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	ATP5J2	P56134	94 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CLDN17	P56750	224 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	IL1RL1	Q01638	556 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	TGFBR3	Q03167	851 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CYLC2	Q14093	348 aa	Predicted RBP	13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	NRF1	Q16656	503 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	VMAC	Q2NL98	169 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	MMEL1	Q495T6	779 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	KLHL17	Q6TDP4	642 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	C5orf46	Q6UWT4	87 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	PRSS57	Q6UWY2	283 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	SSX8	Q7RTT4	187 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	RBM45	Q8IUH3	476 aa	Known RBP	13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	C17orf78	Q8N4C9	275 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	OR6T1	Q8NGN1	323 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	LRRC58	Q96CX6	371 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	MCHR1	Q99705	422 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CCDC134	Q9H6E4	229 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	CISD1	Q9NZ45	108 aa	Known RBP	13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	USP22	Q9UPT9	525 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	ACAN	P16112	2415 aa		13.6	□□□□□ -0.23
PMP22-208	ENST00000580584	ZFHX3	Q15911	3703 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	LOC100653049	A0A140TA62	436 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	ZNF587B	E7ETH6	402 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	LRRN3	E7EW58	273 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	KRT34	O76011	436 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	INHBB	P09529	407 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	PAX1	P15863	534 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	ZNF43	P17038	809 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	PTAFR	P25105	342 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	CDKN1A	P38936	164 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	LTB	Q06643	244 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	C1D	Q13901	141 aa	Known RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	SWT1	Q5T5J6	900 aa	Known RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	SLC22A25	Q6T423	547 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	B3GLCT	Q6Y288	498 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	WDR88	Q6ZMY6	472 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584		Q71RC1	249 aa	Predicted RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	H1FNT	Q75WM6	255 aa	Predicted RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	PATL1	Q86TB9	770 aa	Known RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	SLC30A8	Q8IWU4	369 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	C10orf53	Q8N6V4	93 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	GTPBP3	Q969Y2	492 aa	Known RBP	13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	OXGR1	Q96P68	337 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	MOGAT1	Q96PD6	335 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	ARMCX1	Q9P291	453 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	B3GALT5	Q9Y2C3	310 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	AMDHD2	Q9Y303	409 aa		13.59	□□□□□ -0.23
PMP22-208	ENST00000580584	PRR14L	Q5THK1	2151 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	BBIP1	A8MTZ0	92 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	OVOL3	O00110	214 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	SMAD7	O15105	426 aa	Known RBP	13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	TRAF3IP2	O43734	574 aa	Predicted RBP	13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	FMO6P	O60774	539 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	ZNF432	O94892	652 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	HPR	P00739	348 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	BGLAP	P02818	100 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	THY1	P04216	161 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	C8B	P07358	591 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	NQO1	P15559	274 aa	Known RBP	13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	ROR2	Q01974	943 aa	Known RBP	13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	MAPRE2	Q15555	327 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	COQ5	Q5HYK3	327 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	ENTPD8	Q5MY95	495 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	INTS11	Q5TA45	600 aa	Known RBP	13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	ZNF613	Q6PF04	617 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	KLHL24	Q6TFL4	600 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	CALHM3	Q86XJ0	350 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	OR8J3	Q8NGG0	315 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	OR1K1	Q8NGR3	316 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	SLC26A7	Q8TE54	656 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	C10orf82	Q8WW14	230 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	COX4I2	Q96KJ9	171 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	EPYC	Q99645	322 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	EVA1A	Q9H8M9	152 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	MED4	Q9NPJ6	270 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	MRGBP	Q9NV56	204 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	POU2F3	Q9UKI9	436 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	RCE1	Q9Y256	329 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584	CAPN7	Q9Y6W3	813 aa		13.58	□□□□□ -0.24
PMP22-208	ENST00000580584		A0A096LPE4	126 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584		A0A1W2PPZ6	126 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584		E7EQL1	145 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	CHP2	O43745	196 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	TMCC2	O75069	709 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	SLC43A1	O75387	559 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	LYPD3	O95274	346 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	CD8A	P01732	235 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	HLA-DOB	P13765	273 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	TNFRSF1B	P20333	461 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	MDH1	P40925	334 aa	Known RBP	13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	PRPS1	P60891	318 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	TUBA1B	P68363	451 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	TUBA4A	P68366	448 aa		13.57	□□□□□ -0.24
PMP22-208	ENST00000580584	TBRG1	Q3YBR2	411 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms