RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C1GALT1C1Q96EU7 318 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RASL10BQ96S79 203 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TBL1XR1Q9BZK7 514 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FBXL4Q9UKA2 621 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PEX16Q9Y5Y5 336 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DCDC2BA2VCK2 349 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KLF4O43474 513 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SNX4O95219 450 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 UBL4AP11441 157 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RPS7P62081 194 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF117Q03924 483 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FAM209AQ5JX71 171 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ESX1Q8N693 406 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR51G2Q8NGK0 314 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FGF11Q92914 225 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HS6ST2Q96MM7 605 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC30A2Q9BRI3 323 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDCP1Q9H5V8 836 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HINT3Q9NQE9 182 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NDUFB11Q9NX14 153 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 P4HTMQ9NXG6 502 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MRTO4Q9UKD2 239 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PCSK5Q92824 1860 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MGAQ8IWI9 3026 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IRGMA1A4Y4 181 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LRRN3E7EW58 273 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 STMND1H3BQB6 276 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PPM1BO75688 479 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NCR1O76036 304 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HMGN1P05114 100 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NGFRP08138 427 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CEACAM1P13688 526 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MST1P26927 711 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ITPKBP27987 946 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SDC2P34741 201 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 EVI2BP34910 448 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PNLIPRP2P54317 469 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MRPS15P82914 257 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HNRNPA0Q13151 305 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SKP2Q13309 424 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDK10Q15131 360 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF79Q15937 498 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF791Q3KP31 576 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ALG10BQ5I7T1 473 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF468Q5VIY5 522 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL20RBQ6UXL0 311 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NDUFAF7Q7L592 441 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MRGPREQ86SM8 312 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TMPRSS12Q86WS5 348 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 GRAMD2AQ8IUY3 354 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF527Q8NB42 609 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C7orf57Q8NEG2 295 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SMAP2Q8WU79 429 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NKD1Q969G9 470 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TBX5Q99593 518 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SMAD5Q99717 465 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NPAS1Q99742 590 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF559Q9BR84 538 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DCAF16Q9NXF7 216 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BOLA1Q9Y3E2 137 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ADAM10O14672 748 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF264O43296 627 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NUDT14O95848 222 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CSRP1P21291 193 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PAICSP22234 425 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ETV6P41212 452 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SSPNQ14714 243 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZFP69Q49AA0 526 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 VASH2Q86V25 355 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C17orf47Q8NEP4 570 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR5L2Q8NGL0 311 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ST6GAL2Q96JF0 529 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SECISBP2Q96T21 854 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ABCB9Q9NP78 766 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MEPEQ9NQ76 525 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TXNL4BQ9NX01 149 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RPS6KB2Q9UBS0 482 aa11.53□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PRRC2CQ9Y520 2896 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR6C70A6NIJ9 312 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 G3V3Y1 287 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 FADS1O60427 444 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CDC40O60508 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 PRKCAP17252 672 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SPINK2P20155 84 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 NOS3P29474 1203 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SLC1A3P43003 542 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 GAS1P54826 345 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 PRAMEF20Q5VT98 475 aa11.52□□□□□ -0.57
CDK5RAP3-217ENST00000580287 AADACL4Q5VUY2 407 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms