RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 OR52E4Q8NGH9 312 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 OR6K3Q8NGY3 331 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 GEMIN6Q8WXD5 167 aaKnown RBP17.11■□□□□ 0.33
LIMD2-209ENST00000580222 HTRA1Q92743 480 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 S100PBPQ96BU1 408 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 RPS6KB2Q9UBS0 482 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 POMPQ9Y244 141 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 B3GALT5Q9Y2C3 310 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 SLC35F4A4IF30 521 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 TMEM229AB2RXF0 380 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 H3BML4 177 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 SPRY1O43609 319 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-209ENST00000580222 CIB2O75838 187 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 IGHV4-31P0DP07 118 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 ZNF16P17020 682 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-209ENST00000580222 ZNF17P17021 662 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 IL11P20809 199 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 IGFBP5P24593 272 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 OR1E2P47887 323 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 SESN3P58005 492 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 LOXL1Q08397 574 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-209ENST00000580222 SEZ6L2Q6UXD5 910 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 DEF8Q6ZN54 512 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 OR4D11Q8NGI4 311 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 OR6T1Q8NGN1 323 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 MCHR1Q99705 422 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 WFDC6Q9BQY6 131 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 TRIM2Q9C040 744 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 LPAR3Q9UBY5 353 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 GPR52Q9Y2T5 361 aa17.1■□□□□ 0.33
LIMD2-209ENST00000580222 C7orf72A4D263 438 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 DPRXA6NFQ7 191 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 ERICH4A6NGS2 130 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 ACOT8O14734 319 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 RAMP1O60894 148 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 PRKD3O94806 890 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 CD3EP07766 207 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 SRD5A1P18405 259 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 PSMB1P20618 241 aaKnown RBP17.09■□□□□ 0.33
LIMD2-209ENST00000580222 EIF1P41567 113 aaKnown RBP17.09■□□□□ 0.33
LIMD2-209ENST00000580222 MERTKQ12866 999 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 NPTX1Q15818 432 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 WBP2NLQ6ICG8 309 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 GRINAQ7Z429 371 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 GGNQ86UU5 652 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 RBM45Q8IUH3 476 aaKnown RBP17.09■□□□□ 0.33
LIMD2-209ENST00000580222 GTPBP8Q8N3Z3 284 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-209ENST00000580222 FAM86B1Q8N7N1 296 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 POC1BQ8TC44 478 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 C1orf159Q96HA4 380 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 MRGPRX4Q96LA9 322 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 NPAS1Q99742 590 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 CTPS2Q9NRF8 586 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 EMC9Q9Y3B6 208 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 PCNX3Q9H6A9 2034 aa17.09■□□□□ 0.33
LIMD2-209ENST00000580222 CPSF4LA6NMK7 179 aaKnown RBP17.08■□□□□ 0.32
LIMD2-209ENST00000580222 SS18L1O75177 396 aaPredicted RBP17.08■□□□□ 0.32
LIMD2-209ENST00000580222 IFNW1P05000 195 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 HTR2AP28223 471 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 ELK4P28324 431 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 ADH6P28332 368 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 TAB1Q15750 504 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 SLC25A53Q5H9E4 307 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 ZNF524Q96C55 264 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 PYURFQ96I23 114 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 PRR14Q9BWN1 585 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 TMEM27Q9HBJ8 222 aa17.08■□□□□ 0.32
LIMD2-209ENST00000580222 BARX1Q9HBU1 254 aaPredicted RBP17.08■□□□□ 0.32
LIMD2-209ENST00000580222 TCRBV5S2A0A599 114 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 ELOA3DA6NLF2 546 aaPredicted RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 LINC01387J3KSC0 135 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 ETV2O00321 342 aaPredicted RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 LMX1BO60663 402 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 FMO6PO60774 539 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 TACR3P29371 465 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 SLC1A3P43003 542 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 HTR3AP46098 478 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 POLR2HP52434 150 aaKnown RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 BSPH1Q075Z2 132 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 SELENBP1Q13228 472 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 OR1Q1Q15612 314 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 TMEM44Q2T9K0 475 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 ELOA3BQ3SY89 546 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 ENTPD8Q5MY95 495 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 C1orf146Q5VVC0 180 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 CYB5R2Q6BCY4 276 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 PPP4R4Q6NUP7 873 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 DTX2Q86UW9 622 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 SPATA24Q86W54 205 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 ELOA3Q8NG57 546 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 RNF217Q8TC41 542 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 UTP4Q969X6 686 aaKnown RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 SLC47A1Q96FL8 570 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 GMPPAQ96IJ6 420 aaPredicted RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 RAB3IPQ96QF0 476 aaPredicted RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 SEPHS2Q99611 448 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 TACO1Q9BSH4 297 aaKnown RBP17.07■□□□□ 0.32
LIMD2-209ENST00000580222 OR10A4Q9H209 315 aa17.07■□□□□ 0.32
LIMD2-209ENST00000580222 C12orf49Q9H741 205 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms