RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 USF1P22415 310 aaPredicted RBP11.98□□□□□ -0.49
GGA3-208ENST00000579743 SLC6A2P23975 617 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 SERPINF1P36955 418 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 SELENOPP49908 381 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 PDLIM4P50479 330 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 CLDN17P56750 224 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 ROR2Q01974 943 aaKnown RBP11.98□□□□□ -0.49
GGA3-208ENST00000579743 TMEM249Q2WGJ8 235 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 GTDC1Q4AE62 458 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 GCNT6Q5T4J0 391 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 REEP3Q6NUK4 255 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 ULK3Q6PHR2 472 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 EPGNQ6UW88 154 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 B3GLCTQ6Y288 498 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 CXXC5Q7LFL8 322 aaKnown RBP11.98□□□□□ -0.49
GGA3-208ENST00000579743 ZNF525Q8N782 197 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 PIK3C3Q8NEB9 887 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 OR9I1Q8NGQ6 314 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 DYDC1Q8WWB3 177 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 SLC47A1Q96FL8 570 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 MDFIQ99750 246 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 RABEP2Q9H5N1 569 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 B3GAT2Q9NPZ5 323 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 ABCA1O95477 2261 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 B9A039 149 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 NR5A2O00482 541 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 NPIPB7O75200 414 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 PDE5AO76074 875 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 NQO1P15559 274 aaKnown RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 MRPL19P49406 292 aaKnown RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 VLDLRP98155 873 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 CDK6Q00534 326 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 ALG10BQ5I7T1 473 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 C6orf52Q5T4I8 152 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 AGBL2Q5U5Z8 902 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 FAM91A1Q658Y4 838 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 SLC2A7Q6PXP3 512 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 BLOC1S3Q6QNY0 202 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 H1FNTQ75WM6 255 aaPredicted RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 FAM169BQ8N8A8 192 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 LSMEM1Q8N8F7 131 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 IL17RDQ8NFM7 739 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 MAL2Q969L2 176 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 SPDL1Q96EA4 605 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 ALKBH3Q96Q83 286 aaPredicted RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 VRK1Q99986 396 aaPredicted RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 ASPNQ9BXN1 380 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 BEX2Q9BXY8 128 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 CA10Q9NS85 328 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
GGA3-208ENST00000579743 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 CORINQ9Y5Q5 1042 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 PLCE1Q9P212 2302 aa11.97□□□□□ -0.49
GGA3-208ENST00000579743 TRAV36DV7A0A075B6V5 113 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 ARR3P36575 388 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 GZMKP49863 264 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 RGS8P57771 180 aaPredicted RBP11.96□□□□□ -0.49
GGA3-208ENST00000579743 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
GGA3-208ENST00000579743 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 CARTPTQ16568 116 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 LRIF1Q5T3J3 769 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 DHRS4L2Q6PKH6 230 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 C6orf89Q6UWU4 347 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 EPHX4Q8IUS5 362 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 UEVLDQ8IX04 471 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 NFKBIDQ8NI38 313 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 HTRA1Q92743 480 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 BCL2L2Q92843 193 aaPredicted RBP11.96□□□□□ -0.49
GGA3-208ENST00000579743 ANKRD27Q96NW4 1050 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 SHARPINQ9H0F6 387 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 CCDC167Q9P0B6 97 aa11.96□□□□□ -0.49
GGA3-208ENST00000579743 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.96□□□□□ -0.49
GGA3-208ENST00000579743 VPS13CQ709C8 3753 aa11.96□□□□□ -0.5
GGA3-208ENST00000579743 A0A096LPE4 126 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 LOC102725191A0A1B0GVB3 256 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 A0A1B0GWA3 101 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 RNF212BA8MTL3 300 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 FTCDNL1E5RQL4 147 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 M0R082 166 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 GPRIN2O60269 458 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 ENTPD5O75356 428 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 UPK3AO75631 287 aa11.95□□□□□ -0.5
GGA3-208ENST00000579743 NUDT7P0C024 238 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms