RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 TRAF4Q9BUZ4 470 aaPredicted RBP11.1□□□□□ -0.63
SSH2-205ENST00000577483 NELFAQ9H3P2 528 aa11.1□□□□□ -0.63
SSH2-205ENST00000577483 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
SSH2-205ENST00000577483 A0A087WUJ7 227 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 E7EQL1 145 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 NDUFS7O75251 213 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 ZNF432O94892 652 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 GTF2E2P29084 291 aaKnown RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 GRPRP30550 384 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 CLDN17P56750 224 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 LTBQ06643 244 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 RBBP4Q09028 425 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 DTX2Q86UW9 622 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TSPYL5Q86VY4 417 aaPredicted RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 BHLHE22Q8NFJ8 381 aaPredicted RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 OR4D11Q8NGI4 311 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 OR10A6Q8NH74 314 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 BOD1Q96IK1 185 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 ARHGDIGQ99819 225 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 AMDHD2Q9Y303 409 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TRAV36DV7A0A075B6V5 113 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 M0QX08 132 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TRAF3IP2O43734 574 aaPredicted RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 OR2T1O43869 369 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 LY6G6DO95868 133 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 LGI1O95970 557 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 BGLAPP02818 100 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 HEXAP06865 529 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 CD247P20963 164 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 CDH12P55289 794 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 NRF1Q16656 503 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 RABL3Q5HYI8 236 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 KLHL17Q6TDP4 642 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 C5orf46Q6UWT4 87 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 CLEC9AQ6UXN8 241 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 WDR88Q6ZMY6 472 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 RANBP3LQ86VV4 465 aaPredicted RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 OR6T1Q8NGN1 323 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 TAMM41Q96BW9 452 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 SLC47A1Q96FL8 570 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 OXGR1Q96P68 337 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 MOGAT1Q96PD6 335 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 GDF2Q9UK05 429 aaPredicted RBP11.09□□□□□ -0.63
SSH2-205ENST00000577483 SLC13A4Q9UKG4 626 aa11.09□□□□□ -0.63
SSH2-205ENST00000577483 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
SSH2-205ENST00000577483 ZNF587BE7ETH6 402 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 AIM2O14862 343 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 KRT33AO76009 404 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 HPRP00739 348 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 THY1P04216 161 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
SSH2-205ENST00000577483 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 ZNF43P17038 809 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 PCGF2P35227 344 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 ARFIP2P53365 341 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 KLF10Q13118 480 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 REP15Q6BDI9 236 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 NANOGP8Q6NSW7 305 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 LINC00114Q6XXX2 140 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 RBM45Q8IUH3 476 aaKnown RBP11.08□□□□□ -0.64
SSH2-205ENST00000577483 WDFY1Q8IWB7 410 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 GTPBP3Q969Y2 492 aaKnown RBP11.08□□□□□ -0.64
SSH2-205ENST00000577483 SLC41A3Q96GZ6 507 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 MCHR1Q99705 422 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 LINC00470Q9BZP3 86 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 NANOGQ9H9S0 305 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 TMEM27Q9HBJ8 222 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 SAR1AQ9NR31 198 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 USP22Q9UPT9 525 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 MGAT4BQ9UQ53 548 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 RCE1Q9Y256 329 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 B3GALT5Q9Y2C3 310 aa11.08□□□□□ -0.64
SSH2-205ENST00000577483 CPSF4LA6NMK7 179 aaKnown RBP11.07□□□□□ -0.64
SSH2-205ENST00000577483 MS4A18H0YCH9 400 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 LYPD3O95274 346 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 TTKP33981 857 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 ACVR1BP36896 505 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 PRPS1P60891 318 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 TUBA1BP68363 451 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 TUBA4AP68366 448 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 ROR2Q01974 943 aaKnown RBP11.07□□□□□ -0.64
SSH2-205ENST00000577483 TNK1Q13470 666 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 VMACQ2NL98 169 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 MS4A18Q3C1V0 323 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 ENTPD8Q5MY95 495 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 PHYHD1Q5SRE7 291 aa11.07□□□□□ -0.64
SSH2-205ENST00000577483 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms