RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 RASD1Q9Y272 281 aa11.77□□□□□ -0.53
CUEDC1-203ENST00000577422 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.53
CUEDC1-203ENST00000577422 IGKV1D-42A0A075B6H8 117 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 A0A096LPI6 279 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 A0A0G2JPF8 293 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 TMEM129A0AVI4 362 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 HNRNPCL2B2RXH8 293 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 HNRNPCL3B7ZW38 293 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 B9A039 149 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 OR4A8P0C604 315 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 HNRNPCL4P0DMR1 293 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 KITP10721 976 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 BMP2P12643 396 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 IDO1P14902 403 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 GZMKP49863 264 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 PPOXP50336 477 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 GGTLC2Q14390 218 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 ZSWIM7Q19AV6 140 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 KLHL24Q6TFL4 600 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 ABHD12BQ7Z5M8 362 aaPredicted RBP11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 WDFY1Q8IWB7 410 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 GTF2H4Q92759 462 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 MAL2Q969L2 176 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 OR52B2Q96RD2 323 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 PAIP2Q9BPZ3 127 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 TAPBPLQ9BX59 468 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 PAIP1Q9H074 479 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 BCL2L10Q9HD36 194 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 ZIM2Q9NZV7 527 aa11.76□□□□□ -0.53
CUEDC1-203ENST00000577422 LOC390937A0A1W2PQ73 354 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 TMEM120BA0PK00 339 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 OR6C65A6NJZ3 312 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 TRPC5OSA6NMA1 111 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 CRYAAP02489 173 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 HTR2AP28223 471 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 RPS5P46782 204 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 COPZ1P61923 177 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 SNRPD2P62316 118 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ROR2Q01974 943 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 LARS2Q15031 903 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 RGNQ15493 299 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 MSMPQ1L6U9 139 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 NHLRC1Q6VVB1 395 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 MSANTD1Q6ZTZ1 278 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ANKK1Q8NFD2 765 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 SLC35B4Q969S0 331 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 ZBTB18Q99592 522 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 DOK1Q99704 481 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 CENPHQ9H3R5 247 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 RCE1Q9Y256 329 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 PCDHB14Q9Y5E9 798 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 FKBP7Q9Y680 259 aa11.75□□□□□ -0.53
CUEDC1-203ENST00000577422 LOC100289279A0A1B0GTE1 492 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 TRAF3IP2O43734 574 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 KRT33AO76009 404 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 CBR1P16152 277 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 ZNF23P17027 643 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 NCF2P19878 526 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 PAX7P23759 505 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 GIFP27352 417 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 IL2RGP31785 369 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 THBS4P35443 961 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 IDH3GP51553 393 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 CLDN17P56750 224 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 UBE2NP61088 152 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 ARF1P84077 181 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 ZNF311Q5JNZ3 666 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 ATG16L1Q676U5 607 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 LSMEM1Q8N8F7 131 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 TAAR8Q969N4 342 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 SLC25A36Q96CQ1 311 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 CHODLQ9H9P2 273 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 C12orf10Q9HB07 376 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 GPR35Q9HC97 309 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 MYOZ1Q9NP98 299 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 A4GALTQ9NPC4 353 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 SLC52A3Q9NQ40 469 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 SLC25A37Q9NYZ2 338 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 KCNS2Q9ULS6 477 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 IFT52Q9Y366 437 aa11.74□□□□□ -0.53
CUEDC1-203ENST00000577422 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
CUEDC1-203ENST00000577422 LOC102725191A0A1B0GVB3 256 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms