RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RIBC1Q8N443 379 aaPredicted RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 NATD1Q8N6N6 113 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 OR52E4Q8NGH9 312 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 OR52N5Q8NH56 324 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ZNF563Q8TA94 476 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 AENQ8WTP8 325 aaKnown RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 GIMAP1Q8WWP7 306 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 CNOT9Q92600 299 aaKnown RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 MOAP1Q96BY2 351 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ROPN1LQ96C74 230 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ARL5BQ96KC2 179 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SORT1Q99523 831 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 INPP5KQ9BT40 448 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 TRAF4Q9BUZ4 470 aaPredicted RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 SSBP3Q9BWW4 388 aaPredicted RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 POTEKPQ9BYX7 375 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 DPY30Q9C005 99 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 TRIM2Q9C040 744 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 NMUR2Q9GZQ4 415 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ZNF350Q9GZX5 532 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SLCO5A1Q9H2Y9 848 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ESRP2Q9H6T0 727 aaKnown RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 PNPOQ9NVS9 261 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 CISD1Q9NZ45 108 aaKnown RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 KLHL9Q9P2J3 617 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 RABL2BQ9UNT1 228 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 B3GALT5Q9Y2C3 310 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 WDR45Q9Y484 360 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ARID1AO14497 2285 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 USF3Q68DE3 2245 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 FREM1Q5H8C1 2179 aa5.46□□□□□ -1.53
NUP88-212ENST00000576708 ABCA2Q9BZC7 2435 aa5.46□□□□□ -1.53
NUP88-212ENST00000576708 ROS1P08922 2347 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 CIB4A0PJX0 185 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 UBE2QL1A1L167 161 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 DUXAA6NLW8 204 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ZNF716A6NP11 495 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ZNF724A8MTY0 619 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 E7EQL1 145 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 RNASET2O00584 256 aaKnown RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 ANKRD28O15084 1053 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 KIAA0513O60268 411 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 GPRIN2O60269 458 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 CRLF1O75462 422 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 PGM3O95394 542 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SERPINE1P05121 402 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 GGT1P19440 569 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 PGCP20142 388 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 COX5AP20674 150 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 BGNP21810 368 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 UQCRC2P22695 453 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 CDKN2CP42773 168 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 IDH2P48735 452 aaKnown RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 CDH11P55287 796 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 OR2B6P58173 313 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 BPIFB3P59826 476 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ABCE1P61221 599 aaKnown RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 UFM1P61960 85 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 IRX1P78414 480 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 PLP2Q04941 152 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 DMTNQ08495 405 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 MALLQ13021 153 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 CASP8Q14790 479 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SYPL1Q16563 259 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 GPAT3Q53EU6 434 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SYT14P1Q58G82 188 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SAXO2Q658L1 398 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ABLIM2Q6H8Q1 611 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 PLBD1Q6P4A8 553 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 EMBQ6PCB8 327 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 BHLHB9Q6PI77 547 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 B3GLCTQ6Y288 498 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 EIF3MQ7L2H7 374 aaKnown RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 GALNT5Q7Z7M9 940 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 RNF130Q86XS8 419 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ADGRG3Q86Y34 549 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ZNF433Q8N7K0 673 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 ANKFN1Q8N957 763 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SNX33Q8WV41 574 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 TMEM234Q8WY98 164 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.46□□□□□ -1.54
NUP88-212ENST00000576708 ST8SIA1Q92185 356 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 MUCL1Q96DR8 90 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 TRMT61AQ96FX7 289 aaKnown RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 TEX37Q96LM6 180 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 CCDC106Q9BWC9 280 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 NUF2Q9BZD4 464 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ROPN1BQ9BZX4 212 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 ROPN1Q9HAT0 212 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 NGBQ9NPG2 151 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 YAE1D1Q9NRH1 226 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 SERINC1Q9NRX5 453 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 EXD2Q9NVH0 621 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 ASIC5Q9NY37 505 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 MARCOQ9UEW3 520 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 PCDHGB4Q9UN71 923 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 NOSIPQ9Y314 301 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms