RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 FASP25445 335 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 GPR4P46093 362 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 ARHGDIAP52565 204 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 HMGA2P52926 109 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■□□□□ 10.9
NPLOC4-218ENST00000574964 PDK3Q15120 406 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 SEC23BQ15437 767 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 TAF11Q15544 211 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 ZFP1Q6P2D0 407 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 XKRXQ6PP77 449 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 FAM214BQ7L5A3 538 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 KDM8Q8N371 416 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 ADPRHL1Q8NDY3 354 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 STMN2Q93045 179 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 DUS3LQ96G46 650 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 FAM46AQ96IP4 442 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 SF3B5Q9BWJ5 86 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 ARMC1Q9NVT9 282 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 ZNF629Q9UEG4 869 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-218ENST00000574964 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 C11orf98E9PRG8 122 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 CLOCKO15516 846 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 RNF13O43567 381 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SERPINI2O75830 405 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.343e-8■□□□□ 9.1
NPLOC4-218ENST00000574964 MAKP20794 623 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 AGTR1P30556 359 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 DNAJA1P31689 397 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SLC9A3P48764 834 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SLC16A1P53985 500 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 PUDPQ08623 228 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 GK3PQ14409 553 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 UEVLDQ8IX04 471 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 OR9K2Q8NGE7 335 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 BDH2Q9BUT1 245 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 NDEL1Q9GZM8 345 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 C12orf49Q9H741 205 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 BCO1Q9HAY6 547 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 PROCRQ9UNN8 238 aa12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 NOSIPQ9Y314 301 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-218ENST00000574964 HCFC1P51610 2035 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 FASNP49327 2511 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 EEF1E1-BLOC1S5C9J1V9 151 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 MS4A18H0YCH9 400 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 PLPP3O14495 311 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 EEF1E1O43324 174 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 FZD7O75084 574 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 ENTPD5O75356 428 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 ASAH2BP0C7U1 165 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 AGAP20933 346 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 KIR2DL2P43627 348 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 LIMS1P48059 325 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 SLC17A1Q14916 467 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 MICAQ29983 383 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 MS4A18Q3C1V0 323 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 VWA1Q6PCB0 445 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 OAFQ86UD1 273 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 ZNF100Q8IYN0 542 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 OR51A7Q8NH64 312 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 LILRB4Q8NHJ6 448 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 GIPC3Q8TF64 312 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 ITLN2Q8WWU7 325 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 LIPHQ8WWY8 451 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 FUZQ9BT04 418 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 PIGMQ9H3S5 423 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 KCNJ16Q9NPI9 418 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 PARPBPQ9NWS1 579 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 NOX1Q9Y5S8 564 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 FLVCR1Q9Y5Y0 555 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
NPLOC4-218ENST00000574964 TRAV27A0A087WT01 109 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 UNC119BA6NIH7 251 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 MRPL33O75394 65 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 TNFSF13O75888 250 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 CLDN14O95500 239 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 AQP2P41181 271 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 OMPP47874 163 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms