RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ACTL6AO96019 429 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 CSNK2A2P19784 350 aaPredicted RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 GABRR2P28476 465 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 CD96P40200 585 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 PDZK1IP1Q13113 114 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 UQCC3Q6UW78 93 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 CDK20Q8IZL9 346 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 KCNRGQ8N5I3 272 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 TMIEQ8NEW7 156 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 GRHL3Q8TE85 626 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 CNN2Q99439 309 aaKnown RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 ACTRT3Q9BYD9 372 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 MEPEQ9NQ76 525 aaPredicted RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 SAGE1Q9NXZ1 904 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 MYEF2Q9P2K5 600 aaKnown RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 DHCR7Q9UBM7 475 aaKnown RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 MTFP1Q9UDX5 166 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 ZNF629Q9UEG4 869 aaPredicted RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 CCSO14618 274 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 BCL2L11O43521 198 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 PAPLNO95428 1278 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 CD3DP04234 171 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 IFNA4P05014 189 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 ADRA2CP18825 462 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 METAP1P53582 386 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 TEAD2Q15562 447 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 ZCCHC12Q6PEW1 402 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 STAC2Q6ZMT1 411 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 DPPA4Q7L190 304 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 RANBP3LQ86VV4 465 aaPredicted RBP13.21□□□□□ -0.3
SMG6-215ENST00000574501 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.3
SMG6-215ENST00000574501 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 IL21Q9HBE4 155 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 NIT2Q9NQR4 276 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 C14orf105Q9NVL8 296 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 NCDNQ9UBB6 729 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 EPHA6Q9UF33 1036 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 KLF15Q9UIH9 416 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.3
SMG6-215ENST00000574501 TRBV23-1A0A0A0MS06 115 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 FADS1O60427 444 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 NDUFS6O75380 124 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 RPP14O95059 124 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 OLFM2O95897 454 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 MAS1P04201 325 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 OR2T7P0C7T2 308 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 SPTBP11277 2137 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 CERS1P27544 350 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 AGTR1P30556 359 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 GPR1P46091 355 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 LTBQ06643 244 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 POU4F2Q12837 409 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 AMZ1Q400G9 498 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TMPRSS12Q86WS5 348 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 SYS1Q8N2H4 156 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 ACOT4Q8N9L9 421 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 OR2T27Q8NH04 317 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 SLC2A12Q8TD20 617 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 PAQR8Q8TEZ7 354 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 MTHFD2LQ9H903 347 aaPredicted RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 TCF7L1Q9HCS4 588 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 ZFP57Q9NU63 452 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 ZNF281Q9Y2X9 895 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 NOSIPQ9Y314 301 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 SSX5O60225 188 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 OR4E1P0C645 316 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 HIST1H1CP16403 213 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 CSF2RBP32927 897 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 CSNK1G2P78368 415 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.37e-10■■■□□ 16.1
SMG6-215ENST00000574501 DEFB115Q30KQ5 88 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 GLT8D1Q68CQ7 371 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TMEM215Q68D42 235 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 DCUN1D3Q8IWE4 304 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 DPEP2Q9H4A9 486 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 TM7SF3Q9NS93 570 aa13.2□□□□□ -0.3
SMG6-215ENST00000574501 GPN3Q9UHW5 284 aaPredicted RBP13.2□□□□□ -0.3
SMG6-215ENST00000574501 A0A1B0GVT2 93 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 RAB19A4D1S5 217 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 F5H0A9 414 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 OR2T1O43869 369 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 CALCBP10092 127 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 CTGFP29279 349 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 DLSTP36957 453 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms