RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 LSAMPQ13449 338 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 CEACAM7Q14002 265 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 CAPRIN1Q14444 709 aaKnown RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 OR7A5Q15622 319 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 RUNDC3AQ59EK9 446 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 NCMAPQ5T1S8 102 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SHEQ5VZ18 495 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 FBXW9Q5XUX1 488 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 TMEM225Q6GV28 225 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 REEP3Q6NUK4 255 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 PAQR6Q6TCH4 344 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 DLEU7Q6UYE1 221 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ZNF704Q6ZNC4 412 aaPredicted RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 SERPINA11Q86U17 422 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 P2RY8Q86VZ1 359 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 P3H2Q8IVL5 708 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 LRRC75A-AS1Q8N1F1 130 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 UBE2J2Q8N2K1 259 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ZNF433Q8N7K0 673 aaPredicted RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 TMEM99Q8N816 258 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 NFKBIDQ8NI38 313 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 BBS10Q8TAM1 723 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 STON2Q8WXE9 905 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SLC35B4Q969S0 331 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 APH1AQ96BI3 265 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 MUCL1Q96DR8 90 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 CCL19Q99731 98 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 PIP5K1AQ99755 562 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SIKE1Q9BRV8 207 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 TAPBPLQ9BX59 468 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ESRP2Q9H6T0 727 aaKnown RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 ASB6Q9NWX5 421 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 CORO2BQ9UQ03 480 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 NDUFAF1Q9Y375 327 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 GMEB1Q9Y692 573 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 HRNRQ86YZ3 2850 aaPredicted RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 MED13LQ71F56 2210 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 TRBV5-3A0A0A0MS03 114 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 A0A0G2JND7 137 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 CIB4A0PJX0 185 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 LIPT2A6NK58 231 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 CCT8L1PA6NM43 557 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 FRS3O43559 492 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 AKR7A3O95154 331 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 GGT1P19440 569 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 SLC6A2P23975 617 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 ADSLP30566 484 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 PRKAR1BP31321 381 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 RPL11P62913 178 aaKnown RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 HOXC5Q00444 222 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 TEKQ02763 1124 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 FAPQ12884 760 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 FOXD4Q12950 439 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 SLC17A1Q14916 467 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 PPA1Q15181 289 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 STK11Q15831 433 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 TIMM23BQ5SRD1 257 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 OTUD3Q5T2D3 398 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 GCNT6Q5T4J0 391 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 METTL21CQ5VZV1 264 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 SSX8Q7RTT4 187 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 ATG4DQ86TL0 474 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 KRT73Q86Y46 540 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 C10orf111Q8N326 155 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 ZNF611Q8N823 705 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 LILRB1Q8NHL6 650 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 TSPEARQ8WU66 669 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 AKAP1Q92667 903 aaKnown RBP eCLIP6.55□□□□□ -1.36
NUP88-205ENST00000572809 C3orf49Q96BT1 292 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 ZNF607Q96SK3 696 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 TMEM204Q9BSN7 226 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 SF3B5Q9BWJ5 86 aaKnown RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 RSPO3Q9BXY4 272 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 IKZF5Q9H5V7 419 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 TMEM38AQ9H6F2 299 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 UPB1Q9UBR1 384 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 RPS6KB2Q9UBS0 482 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
NUP88-205ENST00000572809 SLC9A8Q9Y2E8 581 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 FLVCR1Q9Y5Y0 555 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 FREM1Q5H8C1 2179 aa6.55□□□□□ -1.36
NUP88-205ENST00000572809 TMEM82A0PJX8 343 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 PRORSD1PA6NEY8 169 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 DPRXA6NFQ7 191 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 OR5H1A6NKK0 313 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 AQP7P3A6NL99 342 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 HS3ST1O14792 307 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ANGPT2O15123 496 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 CLOCKO15516 846 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 TPST1O60507 370 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 NPIPB7O75200 414 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 SERPINB7O75635 380 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 RAD51DO75771 328 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 VAMP5O95183 116 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 COX5AP20674 150 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 BSPH1Q075Z2 132 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms