RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 IGFBP1P08833 259 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CELA3BP08861 270 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 ADRA2AP08913 450 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 IFNGR1P15260 489 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CFPP27918 469 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 ARR3P36575 388 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CDKN2CP42773 168 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 DVL1P1P54792 670 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 NME5P56597 212 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CLDN17P56750 224 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 UFM1P61960 85 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 POU3F1Q03052 451 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 TRIP10Q15642 601 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CHI3L2Q15782 390 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 ADRM1Q16186 407 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 OGFOD2Q6N063 350 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 MYPOPQ86VE0 399 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CCDC36Q8IYA8 594 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 KDM8Q8N371 416 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CLIP4Q8N3C7 705 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 MFSD8Q8NHS3 518 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 PNPT1Q8TCS8 783 aaKnown RBP8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 STK35Q8TDR2 534 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 ZFAND2BQ8WV99 257 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CKAP2Q8WWK9 683 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 OR52E6Q96RD3 313 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 SORT1Q99523 831 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 NUF2Q9BZD4 464 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 MEAF6Q9HAF1 191 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 GPR35Q9HC97 309 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 DYNLRB1Q9NP97 96 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 CALML5Q9NZT1 146 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 P2RX2Q9UBL9 471 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 RCE1Q9Y256 329 aa8.53□□□□□ -1.04
TRAPPC1-205ENST00000572656 ZNF503-AS2A6NEH8 195 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 B4DSR2 109 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 ALDOCP09972 364 aaKnown RBP8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 PNMTP11086 282 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 PRG2P13727 222 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 ZNF43P17038 809 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 IL12AP29459 219 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 SLC1A6P48664 564 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 EVX1P49640 407 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CRISP3P54108 245 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CCNIQ14094 377 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 DAG1Q14118 895 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 LARS2Q15031 903 aaKnown RBP8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 RNF220Q5VTB9 566 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 DEF8Q6ZN54 512 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 RINLQ6ZS11 566 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CDK20Q8IZL9 346 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 GPR137CQ8N3F9 429 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 SLC25A36Q96CQ1 311 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 OXGR1Q96P68 337 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 PTDSS2Q9BVG9 487 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 PLA2G12AQ9BZM1 189 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 OCEL1Q9H607 264 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 ARMC7Q9H6L4 198 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 NOX3Q9HBY0 568 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CRLF2Q9HC73 371 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 AIG1Q9NVV5 245 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 B3GAT1Q9P2W7 334 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 HAO1Q9UJM8 370 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 ZNF232Q9UNY5 417 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 USP22Q9UPT9 525 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 ZNF443Q9Y2A4 671 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CMAHPQ9Y471 501 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 CHST2Q9Y4C5 530 aa8.52□□□□□ -1.05
TRAPPC1-205ENST00000572656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 A0A0G2JPF8 293 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 ZNF99A8MXY4 864 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 HNRNPCL2B2RXH8 293 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 HNRNPCL3B7ZW38 293 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 LYNX1G3V0Z9 82 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 RFXANKO14593 260 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 HNRNPCL1O60812 293 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 FZD7O75084 574 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 VENTXO95231 258 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 BCHEP06276 602 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 HNRNPCL4P0DMR1 293 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 LYNX1P0DP58 116 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 ETFAP13804 333 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 NR4A1P22736 598 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 GTF2E2P29084 291 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 RPS5P46782 204 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 CAPZA2P47755 286 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 MVDP53602 400 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 IL1RL1Q01638 556 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 EGR4Q05215 589 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 NPRL3Q12980 569 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 SNTB2Q13425 540 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 C1DQ13901 141 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 CEACAM16Q2WEN9 425 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 KRT80Q6KB66 452 aa8.51□□□□□ -1.05
TRAPPC1-205ENST00000572656 SERPINA11Q86U17 422 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms