RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 GCNT6Q5T4J0 391 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 ANKRD16Q6P6B7 361 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 DHRS4L2Q6PKH6 230 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 ELOA3Q8NG57 546 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 RHNO1Q9BSD3 238 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 CCDC28BQ9BUN5 200 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 CRNNQ9UBG3 495 aaPredicted RBP15.77■□□□□ 0.12
CHD3-214ENST00000572579 MS4A18H0YCH9 400 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 M0R082 166 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 ERLIN1O75477 346 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 AHSA1O95433 338 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 HPRP00739 348 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 IGLV1-44P01699 117 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 CELA3BP08861 270 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 HLA-DOBP13765 273 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 CALCRP30988 508 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 CLDN17P56750 224 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 MS4A18Q3C1V0 323 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 AGKQ53H12 422 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 REEP3Q6NUK4 255 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 DEPDC4Q8N2C3 294 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 ZNF417Q8TAU3 575 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 C10orf105Q8TEF2 133 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 SLC38A2Q96QD8 506 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 ZNF587Q96SQ5 575 aaPredicted RBP15.76■□□□□ 0.11
CHD3-214ENST00000572579 LINC00470Q9BZP3 86 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 ARMC7Q9H6L4 198 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 FKRPQ9H9S5 495 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 YAE1D1Q9NRH1 226 aa15.76■□□□□ 0.11
CHD3-214ENST00000572579 ARPC4-TTLL3A0A0A6YYG9 625 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 TMEM247A6NEH6 219 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 ZNF587BE7ETH6 402 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
CHD3-214ENST00000572579 WNT11O96014 354 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 CBLP22681 906 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 GRPRP30550 384 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 ARF1P84077 181 aaKnown RBP15.75■□□□□ 0.11
CHD3-214ENST00000572579 ROR2Q01974 943 aaKnown RBP15.75■□□□□ 0.11
CHD3-214ENST00000572579 HGFACQ04756 655 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 SELPLGQ14242 412 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 TMEM249Q2WGJ8 235 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 C1QTNF12Q5T7M4 302 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 PTOV1Q86YD1 416 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 TMEM123Q8N131 208 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 MAGEE2Q8TD90 523 aaPredicted RBP15.75■□□□□ 0.11
CHD3-214ENST00000572579 ATP6V1G3Q96LB4 118 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 OXGR1Q96P68 337 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 CPPED1Q9BRF8 314 aaPredicted RBP15.75■□□□□ 0.11
CHD3-214ENST00000572579 RAD21L1Q9H4I0 556 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 ZNF385DQ9H6B1 395 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 C12orf10Q9HB07 376 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 GPR35Q9HC97 309 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 OBP2BQ9NPH6 170 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 KLHL14Q9P2G3 628 aa15.75■□□□□ 0.11
CHD3-214ENST00000572579 C5orf58C9J3I9 102 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 RPL36A-HNRNPH2H7BZ11 118 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 TRAF3IP2O43734 574 aaPredicted RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 TLX2O43763 284 aaPredicted RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 KRT33AO76009 404 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 F12P00748 615 aaPredicted RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 CECR9P0C854 216 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 AQP1P29972 269 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 EFNA4P52798 201 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 STX1BP61266 288 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 NAAAQ02083 359 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 LOXL1Q08397 574 aaPredicted RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 RUNDC3AQ59EK9 446 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 H1FNTQ75WM6 255 aaPredicted RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 RETREG3Q86VR2 466 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 HIPK1Q86Z02 1210 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 LRRC8CQ8TDW0 803 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 SLC38A4Q969I6 547 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 FBXO17Q96EF6 278 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 THOC1Q96FV9 657 aaKnown RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 SLC41A3Q96GZ6 507 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 MOGAT1Q96PD6 335 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 SORCS2Q96PQ0 1159 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 OR2M2Q96R28 347 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 TNFRSF13CQ96RJ3 184 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 TMEM38AQ9H6F2 299 aa15.74■□□□□ 0.11
CHD3-214ENST00000572579 HEATR1Q9H583 2144 aaKnown RBP15.74■□□□□ 0.11
CHD3-214ENST00000572579 ARFGEF3Q5TH69 2177 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 A0A087WUJ7 227 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 A0A0B4J2E0 115 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 LOC102725191A0A1B0GVB3 256 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 A0A1B0GX12 115 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 VWC2LB2RUY7 222 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 LRRN3E7EW58 273 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 MFN2O95140 757 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 BGLAPP02818 100 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 THY1P04216 161 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 ZNF43P17038 809 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 ATP4BP51164 291 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 PCBP3P57721 371 aaKnown RBP15.73■□□□□ 0.11
CHD3-214ENST00000572579 SCARB2Q14108 478 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 OR1Q1Q15612 314 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 ADIPOQQ15848 244 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 ALG10BQ5I7T1 473 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 FAM69AQ5T7M9 428 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms