RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 GALNT5Q7Z7M9 940 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 GPAT4Q86UL3 456 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 GTF2IRD2Q86UP8 949 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 OFCC1Q8IZS5 231 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 PIK3C3Q8NEB9 887 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 OR6S1Q8NH40 331 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 TMEM239Q8WW34 195 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 LZICQ8WZA0 190 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 ZHX1-C8orf76Q96EF9 292 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 PYURFQ96I23 114 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 DHRS1Q96LJ7 313 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 NSMCE2Q96MF7 247 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 NAA11Q9BSU3 229 aaPredicted RBP6.17□□□□□ -1.42
SMG6-209ENST00000571442 FUZQ9BT04 418 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 KLHL4Q9C0H6 718 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 GP6Q9HCN6 339 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 SLC7A10Q9NS82 523 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 MED29Q9NX70 200 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 NDE1Q9NXR1 346 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 VNN3Q9NY84 501 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 MRPL39Q9NYK5 338 aaKnown RBP6.17□□□□□ -1.42
SMG6-209ENST00000571442 TAS2R5Q9NYW4 299 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 ACTR3BQ9P1U1 418 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 RPS6KA6Q9UK32 745 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 PRPF19Q9UMS4 504 aaKnown RBP6.17□□□□□ -1.42
SMG6-209ENST00000571442 NOSIPQ9Y314 301 aaKnown RBP6.17□□□□□ -1.42
SMG6-209ENST00000571442 TESMINQ9Y4I5 508 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
SMG6-209ENST00000571442 FAM221AA4D161 298 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 C11orf98E9PRG8 122 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 CDC42EP2O14613 210 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 GSC2O15499 205 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 OR2T1O43869 369 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 UPK3AO75631 287 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 LYZL6O75951 148 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 OR7A10O76100 309 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 ITGA5P08648 1049 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 COX5AP20674 150 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 LOXP28300 417 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 KIR2DL3P43628 341 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 MNAT1P51948 309 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 CLDN17P56750 224 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 SORDQ00796 357 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 ST3GAL3Q11203 375 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 PPP1R8Q12972 351 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 TRIM25Q14258 630 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 POU4F3Q15319 338 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 C9orf135Q5VTT2 229 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 TMEM225Q6GV28 225 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 NIPAL3Q6P499 406 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 PODNL1Q6PEZ8 512 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 C5orf46Q6UWT4 87 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 CASP12Q6UXS9 341 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 H1FNTQ75WM6 255 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 NRMQ8IXM6 262 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 C10orf53Q8N6V4 93 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 LRRC75AQ8NAA5 344 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 ADPRHL1Q8NDY3 354 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 OR5J2Q8NH18 312 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 MOSPD2Q8NHP6 518 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 SLC7A13Q8TCU3 470 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 NRGNQ92686 78 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 TMEM45BQ96B21 275 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 ZNF837Q96EG3 531 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 ZC3HAV1LQ96H79 300 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 MPP4Q96JB8 637 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 OXGR1Q96P68 337 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 HS3ST6Q96QI5 342 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 SEPHS2Q99611 448 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 EPYCQ99645 322 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 GPA33Q99795 319 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 BTBD10Q9BSF8 475 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 EMC6Q9BV81 110 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 SF3B5Q9BWJ5 86 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 POLR2J2Q9GZM3 115 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 POLR2J3Q9H1A7 115 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 NMNAT1Q9HAN9 279 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 SELENONQ9NZV5 590 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 C6orf203Q9P0P8 240 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 FOXD3Q9UJU5 478 aaPredicted RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 SAMD4AQ9UPU9 718 aaKnown RBP6.16□□□□□ -1.42
SMG6-209ENST00000571442 RASD1Q9Y272 281 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 B3GALT5Q9Y2C3 310 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
SMG6-209ENST00000571442 OTOGQ6ZRI0 2925 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 ABCA4P78363 2273 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 ANKHD1Q8IWZ3 2542 aaKnown RBP6.15□□□□□ -1.42
SMG6-209ENST00000571442 TRAV27A0A087WT01 109 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 LOC102725191A0A1B0GVB3 256 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 A0A1W2PR80 420 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 SH3D21A4FU49 640 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 TUBAL3A6NHL2 446 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 DEFB108AA8MXU0 73 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 C16orf97H3BN30 126 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 GYG2O15488 501 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 MRPL33O75394 65 aaKnown RBP6.15□□□□□ -1.42
SMG6-209ENST00000571442 SERPINI2O75830 405 aa6.15□□□□□ -1.42
SMG6-209ENST00000571442 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
SMG6-209ENST00000571442 F13BP05160 661 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms