RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZADH2Q8N4Q0 377 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 AMER3Q8N944 861 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TMEM178AQ8NBL3 297 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 NPEPL1Q8NDH3 523 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ZNF740Q8NDX6 193 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 PLPP5Q8NEB5 264 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 OR2L5Q8NG80 312 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 OR11G2Q8NGC1 345 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 OR4C3Q8NH37 302 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 OR2T6Q8NHC8 308 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 UBTD2Q8WUN7 234 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 PHLDA1Q8WV24 401 aaPredicted RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 CCDC107Q8WV48 283 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ESAMQ96AP7 390 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RSRC1Q96IZ7 334 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 SERINC2Q96SA4 455 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ATOH8Q96SQ7 321 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RUFY1Q96T51 708 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 SERPINI1Q99574 410 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 LPAR4Q99677 370 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TBCDQ9BTW9 1192 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ERVK-6Q9BXR3 956 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RHBGQ9H310 441 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ELOVL6Q9H5J4 265 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 NOL11Q9H8H0 719 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 SERINC1Q9NRX5 453 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 MS4A12Q9NXJ0 267 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 STMN3Q9NZ72 180 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CPSF2Q9P2I0 782 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 B3GAT1Q9P2W7 334 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TBK1Q9UHD2 729 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 IKZF3Q9UKT9 509 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 SNX6Q9UNH7 406 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 EXOGQ9Y2C4 368 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 KALRNO60229 2985 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 IGHV1-45A0A0A0MS14 117 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 A0A1W2PQ72 361 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 GLOD5A6NK44 160 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 SMIM23A6NLE4 172 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 HMGB1P1B2RPK0 211 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 H7C423 109 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 FOXE1O00358 373 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 E2F3O00716 465 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 COPEO14579 308 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 P2RX6O15547 441 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CHST10O43529 356 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 B4GALT2O60909 372 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 GLRA3O75311 464 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ALOX12BO75342 701 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 RDH16O75452 317 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ERLIN1O75477 346 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CRCPO75575 148 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CEACAM4O75871 244 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 SUPT7LO94864 414 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 KRT6AP02538 564 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 STATHP02808 62 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 KRT6BP04259 564 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 SERPINA7P05543 415 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 NUDT17P0C025 328 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 DANCRP0C864 163 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 MYL2P10916 166 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 IMPDH1P20839 514 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 HIST1H1TP22492 207 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 EEF1DP29692 281 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 PPP2R1BP30154 601 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 HSD17B3P37058 310 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 SLCO1A2P46721 670 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 KRT6CP48668 564 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CSRP3P50461 194 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CCNG1P51959 295 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 PLA2G16P53816 162 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 BTN3A2P78410 334 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 MAT1AQ00266 395 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZNF33BQ06732 778 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 STX4Q12846 297 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 LCP2Q13094 533 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 IFT88Q13099 833 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CUL3Q13618 768 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 DDX39BQ13838 428 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 SERTAD2Q14140 314 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ABRAXAS2Q15018 415 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 C18orf21Q32NC0 220 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 PDLIM3Q53GG5 364 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 CFAP157Q5JU67 520 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 KHDRBS2Q5VWX1 349 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 OR4C11Q6IEV9 310 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZNF613Q6PF04 617 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 TMEM205Q6UW68 189 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 IGFL3Q6UXB1 125 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 PAGE2Q7Z2X7 111 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 GOLGA7Q7Z5G4 137 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 LINC00346Q8IVM7 164 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZNF595Q8IYB9 648 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 CCDC63Q8NA47 563 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms