RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NIPSNAP1Q9BPW8 284 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MRPL57Q9BQC6 102 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 MESP1Q9BRJ9 268 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TTYH2Q9BSA4 534 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PCGF1Q9BSM1 259 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CADM1Q9BY67 442 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ACTRT3Q9BYD9 372 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ENKD1Q9H0I2 346 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 C11orf54Q9H0W9 315 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 GSTO2Q9H4Y5 243 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 NARFLQ9H6Q4 476 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LDAHQ9H6V9 325 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 GPN2Q9H9Y4 310 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ELOVL3Q9HB03 270 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 GPR35Q9HC97 309 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MCCC2Q9HCC0 563 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 HRASLSQ9HDD0 168 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ZFP64Q9NPA5 681 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PARD6AQ9NPB6 346 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 EQTNQ9NQ60 294 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FBXO8Q9NRD0 319 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FAIMQ9NVQ4 179 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LYARQ9NX58 379 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 PTTG3PQ9NZH4 202 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ZNF282Q9UDV7 671 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 IL36AQ9UHA7 158 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OPN4Q9UHM6 478 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 B9D1Q9UPM9 204 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 POLR3HQ9Y535 204 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 PCYT1BQ9Y5K3 369 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 MMP24Q9Y5R2 645 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OAS3Q9Y6K5 1087 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 CPAMD8Q8IZJ3 1885 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 GON4LQ3T8J9 2241 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PCNX3Q9H6A9 2034 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 A0A1B0GV72 72 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TMEM129A0AVI4 362 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TSPAN11A1L157 253 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PRR23AA6NEV1 266 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TMEM202A6NGA9 273 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 METTL15A6NJ78 407 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LINC00587B1AMM8 73 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 H3BNX3 289 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 KPNA3O00505 521 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 DLGAP1O14490 977 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SDHDO14521 159 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RFXANKO14593 260 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PFDN6O15212 129 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SURF4O15260 269 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TCAPO15273 167 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 INPP4BO15327 924 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TMPRSS2O15393 492 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 FLRT2O43155 660 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 XRCC2O43543 280 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SNAI2O43623 268 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MED6O75586 246 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ADAP1O75689 374 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SUPT7LO94864 414 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SLC25A14O95258 325 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ETHE1O95571 254 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 NFATC1O95644 943 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CPNE6O95741 557 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LDOC1O95751 146 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ANGPTL1O95841 491 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SOD1P00441 154 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 IFNA2P01563 188 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 IFNA5P01569 189 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 HIST1H2ABP04908 130 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 DCNP07585 359 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 RD3LP0DJH9 198 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LYL1P12980 280 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 COX4I1P13073 169 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 DAOP14920 347 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 UQCRBP14927 111 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ETS2P15036 469 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF182P17025 639 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 HIST1H2ADP20671 130 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RPS3P23396 243 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMG6-208ENST00000570874 CXCR2P25025 360 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CD82P27701 267 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 C21orf33P30042 268 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ACVR1BP36896 505 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RPL5P46777 297 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 UQCRFS1P47985 274 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 IDH2P48735 452 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 COMPP49747 757 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ASCL1P50553 236 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PRKXP51817 358 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CTSCP53634 463 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 AP2S1P53680 142 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 RPL15P61313 204 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 RPS7P62081 194 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 HERV-K104P63124 156 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PSPHP78330 225 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SSBP2P81877 361 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 MRPS22P82650 360 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF45Q02386 682 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TEKQ02763 1124 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PJVKQ0ZLH3 352 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 NFATC2Q13469 925 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms