RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DNAJA4Q8WW22 397 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 STON2Q8WXE9 905 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 MAGEB18Q96M61 343 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 ALKBH3Q96Q83 286 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZNF607Q96SK3 696 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 DHRS9Q9BPW9 319 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 GRIP2Q9C0E4 1043 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 IKZF5Q9H5V7 419 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM38AQ9H6F2 299 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 VIPAS39Q9H9C1 493 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C12orf10Q9HB07 376 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC52A3Q9NQ40 469 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 SELENONQ9NZV5 590 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 TESQ9UGI8 421 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 ANGPT4Q9Y264 503 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 GMEB1Q9Y692 573 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 HIVEP2P31629 2446 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 A0A1B0GWA3 101 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 FTCDNL1E5RQL4 147 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 E7EQL1 145 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 ANGPT2O15123 496 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 SERPINB7O75635 380 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 CD8AP01732 235 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 IGHV4-39P01824 125 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 HTR2AP28223 471 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 AQP1P29972 269 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 SELENOPP49908 381 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 RGS8P57771 180 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 PPP2R2BQ00005 443 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 SLC25A3Q00325 362 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 NRF1Q16656 503 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 ALG10BQ5I7T1 473 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 NIPAL3Q6P499 406 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 DHDDSQ86SQ9 333 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 FBXL14Q8N1E6 418 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 LSMEM1Q8N8F7 131 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 WDR31Q8NA23 367 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 BHLHE22Q8NFJ8 381 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 RNF217Q8TC41 542 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 SLC38A4Q969I6 547 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 KTI12Q96EK9 354 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 THOC1Q96FV9 657 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 ADAD1Q96M93 576 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 CPPED1Q9BRF8 314 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 PTDSS2Q9BVG9 487 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 FKRPQ9H9S5 495 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 OBP2BQ9NPH6 170 aa10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 FN1P02751 2386 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-205ENST00000570828 CADP27708 2225 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 AIM2O14862 343 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 OR2T1O43869 369 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ZNF43P17038 809 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 GPX2P18283 190 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 PTNP21246 168 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 PCSK6P29122 969 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 TTKP33981 857 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ACVR1BP36896 505 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 FABP6P51161 128 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 IL1RL1Q01638 556 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 EGR4Q05215 589 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 C1DQ13901 141 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 CYP51A1Q16850 503 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 FAM69AQ5T7M9 428 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ZNF544Q6NX49 715 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 B3GLCTQ6Y288 498 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 COMTD1Q86VU5 262 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 RANBP3LQ86VV4 465 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ARMC8Q8IUR7 673 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 EPHX4Q8IUS5 362 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 MUC15Q8N387 334 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 SIKE1Q9BRV8 207 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 CACNG6Q9BXT2 260 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 TMEM27Q9HBJ8 222 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 NPHS2Q9NP85 383 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 CBLN4Q9NTU7 201 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 RCE1Q9Y256 329 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 NDUFAF1Q9Y375 327 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 ATP23Q9Y6H3 246 aa10.82□□□□□ -0.68
CTDNEP1-205ENST00000570828 JMJD1CQ15652 2540 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 TRAV36DV7A0A075B6V5 113 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 A0A0G2JND7 137 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 M0R082 166 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 AKAP8O43823 692 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 TPST1O60507 370 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 NDUFS7O75251 213 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 SLC43A1O75387 559 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 LGI1O95970 557 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 BMP4P12644 408 aa10.81□□□□□ -0.68
CTDNEP1-205ENST00000570828 NQO1P15559 274 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms