RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 LGALS13Q9UHV8 139 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF443Q9Y2A4 671 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-220ENST00000569827 CMYA5Q8N3K9 4069 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 TMEM229AB2RXF0 380 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 FAM157AC9JC47 383 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 FTCDNL1E5RQL4 147 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 FAAHO00519 579 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 TYROBPO43914 113 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 AHSA1O95433 338 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 NUDT17P0C025 328 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 ETFAP13804 333 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 UQCRBP14927 111 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 BGNP21810 368 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 ALDH3B1P43353 468 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 EGR4Q05215 589 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 IFFO1Q0D2I5 559 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 MAD2L1BPQ15013 274 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 CEACAM16Q2WEN9 425 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 ALKBH6Q3KRA9 238 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 WBP2NLQ6ICG8 309 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 DEF8Q6ZN54 512 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 WDFY1Q8IWB7 410 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 PEX5LQ8IYB4 626 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF786Q8N393 782 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 RIBC1Q8N443 379 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 VPS37AQ8NEZ2 397 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 NUP37Q8NFH4 326 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 SEMA6DQ8NFY4 1073 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 OR4F15Q8NGB8 312 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 NEU4Q8WWR8 484 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 OR52E6Q96RD3 313 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 SYT3Q9BQG1 590 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 PTDSS2Q9BVG9 487 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 MRPL37Q9BZE1 423 aaKnown RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF442Q9H7R0 627 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 MTHFD2LQ9H903 347 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 CRLF2Q9HC73 371 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 GPR35Q9HC97 309 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 MYEF2Q9P2K5 600 aaKnown RBP10.41□□□□□ -0.74
CAPN3-220ENST00000569827 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 BTNL2Q9UIR0 455 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
CAPN3-220ENST00000569827 A8MVM7 634 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 M0R3G1 203 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 KCNAB3O43448 404 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 SPRY1O43609 319 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-220ENST00000569827 NPIPB7O75200 414 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF432O94892 652 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 HLA-HP01893 362 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 HPXP02790 462 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 SERPINE1P05121 402 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 CBR1P16152 277 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 LBPP18428 481 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 COL8A2P25067 703 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 SEC24CP53992 1094 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 CLNS1AP54105 237 aaKnown RBP10.4□□□□□ -0.74
CAPN3-220ENST00000569827 AQP5P55064 265 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 COPZ1P61923 177 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 ACTG1P63261 375 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 PIGFQ07326 219 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 DAG1Q14118 895 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 GNA13Q14344 377 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 SMU1Q2TAY7 513 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 LIN52Q52LA3 116 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 ELFN2Q5R3F8 820 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 LRP11Q86VZ4 500 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 LRRC34Q8IZ02 419 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 GPR137CQ8N3F9 429 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 CLDND2Q8NHS1 167 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-220ENST00000569827 BOD1Q96IK1 185 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 TREM2Q9NZC2 230 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 RASD1Q9Y272 281 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 RAP2CQ9Y3L5 183 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 TGP01266 2768 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 TRRAPQ9Y4A5 3859 aa10.4□□□□□ -0.74
CAPN3-220ENST00000569827 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 DSPPQ9NZW4 1301 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 M0R082 166 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 SDHDO14521 159 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 NCR1O76036 304 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 HPRP00739 348 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 ERCC1P07992 297 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 NUDT7P0C024 238 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 TFPTP0C1Z6 253 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 HLA-DOBP13765 273 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF43P17038 809 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 GTF2E2P29084 291 aaKnown RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 CRATP43155 626 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 SLC1A6P48664 564 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 RPL14P50914 215 aaKnown RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 MVDP53602 400 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 DVL1P1P54792 670 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 VSNL1P62760 191 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 GSTA3Q16772 222 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 DPY19L1Q2PZI1 675 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 COMTD1Q86VU5 262 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms