RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CYS1Q717R9 158 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FAM47BQ8NA70 645 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 LHPPQ9H008 270 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ELOVL6Q9H5J4 265 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PRDM7Q9NQW5 492 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ING3Q9NXR8 418 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 IL17BQ9UHF5 180 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CD84Q9UIB8 345 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 TMEFF2Q9UIK5 374 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 GPR160Q9UJ42 338 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ASB1Q9Y576 335 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 TSSC4Q9Y5U2 329 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 NPTNQ9Y639 398 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CENPXA8MT69 81 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 H0YIG0 161 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CREG1O75629 220 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ZFAND5O76080 213 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 OR4F21O95013 312 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PRF1P14222 555 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PMCHP20382 165 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FPR1P21462 350 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 RPL14P50914 215 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 MMP16P51512 607 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MAPK12P53778 367 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CXXC5Q7LFL8 322 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 OVCH1Q7RTY7 1134 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SATL1Q86VE3 508 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CPSF7Q8N684 471 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 FADS6Q8N9I5 356 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CDS1Q92903 461 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MRGPRX4Q96LA9 322 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ZNF184Q99676 751 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 LRRC61Q9BV99 259 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 JAM3Q9BX67 310 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SSU72Q9NP77 194 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 PEMTQ9UBM1 199 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 DSCR3O14972 297 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 KRT33AO76009 404 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 BRI3O95415 125 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 H6PDO95479 791 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CBX6O95503 412 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 G6PDP11413 515 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FGF3P11487 239 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 PITPNAQ00169 270 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CRB2Q5IJ48 1285 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 OR52W1Q6IF63 320 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FRMD7Q6ZUT3 714 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CSNK1A1LQ8N752 337 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 RNF148Q8N7C7 305 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PLA2G15Q8NCC3 412 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 RPL3LQ92901 407 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 MMABQ96EY8 250 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 NEDD4LQ96PU5 975 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 EBF4Q9BQW3 602 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PPA2Q9H2U2 334 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FAM96AQ9H5X1 160 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PDFQ9HBH1 243 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MARCOQ9UEW3 520 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 TECTAO75443 2155 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 A0A1B0GX78 115 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PRSS37A4D1T9 235 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ANXA2P2A6NMY6 339 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CLDN7O95471 211 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 IFNA2P01563 188 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ZNF28P17035 718 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 HLA-GP17693 338 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 GNAZP19086 355 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CA5AP35218 305 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SSR2P43308 183 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MAGEA12P43365 314 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 RGS6P49758 472 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 TIAL1Q01085 375 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMG1-217ENST00000569764 RAB32Q13637 225 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 MPPED2Q15777 294 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 RPS27LQ71UM5 84 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 LINGO2Q7L985 606 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SLC46A3Q7Z3Q1 461 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PRSS42Q7Z5A4 293 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 OR13J1Q8NGT2 312 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SSC4DQ8WTU2 575 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 TADA1Q96BN2 335 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PDCD10Q9BUL8 212 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ZNF350Q9GZX5 532 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 C1orf198Q9H425 327 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 FSCN3Q9NQT6 498 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 TNFRSF18Q9Y5U5 241 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 LAMA5O15230 3695 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 NKX2-2O95096 273 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 GABRA1P14867 456 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 UGT2B15P54855 530 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 BNIP2Q12982 314 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 SMN1Q16637 294 aaKnown RBP6.09□□□□□ -1.43
SMG1-217ENST00000569764 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
SMG1-217ENST00000569764 ASRGL1Q7L266 308 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 TRIM46Q7Z4K8 759 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 LHFPL3Q86UP9 236 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 C10orf107Q8IVU9 208 aa6.09□□□□□ -1.43
SMG1-217ENST00000569764 GID4Q8IVV7 300 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms