RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CLEC7AQ9BXN2 247 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NLNQ9BYT8 704 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 STRADBQ9C0K7 418 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ELOVL3Q9HB03 270 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CHST11Q9NPF2 352 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 DYRK4Q9NR20 520 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM9Q9P0T7 183 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ERVK-18Q9QC07 812 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 RNF14Q9UBS8 474 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 IL36AQ9UHA7 158 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CRLS1Q9UJA2 301 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 VANGL2Q9ULK5 521 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF490Q9ULM2 529 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CHTOPQ9Y3Y2 248 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 MMP24Q9Y5R2 645 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 FER1L5A0AVI2 2057 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ITPR2Q14571 2701 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 UNC79Q9P2D8 2635 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 A0A075B6Q4 140 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 IGHV5-10-1A0A0J9YXX1 117 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 WASHC1A8K0Z3 465 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TCP11X1B4DZS4 312 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 LMO7DNF2Z398 122 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 F5H5T6 163 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SGK494L7N484 410 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 M0QYV0 167 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 WRBO00258 174 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 FOXE1O00358 373 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ARPC1BO15143 372 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 POLR2DO15514 142 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR1F1O43749 312 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RAD1O60671 282 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 BCAS1O75363 584 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 CTAG2O75638 210 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 PAHP00439 452 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANXA4P09525 319 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GSTT2P0CG29 244 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GSTT2BP0CG30 244 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 STAG3L3P0CL85 134 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ADRB3P13945 408 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TPSB2P20231 275 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GLRA1P23415 457 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ACKR3P25106 362 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 HNRNPH3P31942 346 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 OPRL1P41146 370 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GRIA1P42261 906 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 LEPRP48357 1165 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ETV1P50549 477 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 CCR4P51679 360 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC8A3P57103 927 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 PFN3P60673 137 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 HERV-K104P61576 105 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZFP36L1Q07352 338 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 MFGE8Q08431 387 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 FGL1Q08830 312 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 BST2Q10589 180 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLRB1Q12918 225 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 IRF4Q15306 451 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TPSAB1Q15661 275 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 EXT1Q16394 746 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLHL40Q2TBA0 621 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 LINC01620Q4KN68 170 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 KCNIP4Q6PIL6 250 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC25A47Q6Q0C1 308 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 WASH2PQ6VEQ5 465 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF841Q6ZN19 808 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GTSCR1Q86UQ5 136 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 HOGA1Q86XE5 327 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 EGFL6Q8IUX8 553 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 PARP8Q8N3A8 854 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RAB42Q8N4Z0 105 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ARFGAP2Q8N6H7 521 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RELL2Q8NC24 303 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 C17orf47Q8NEP4 570 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR52K1Q8NGK4 314 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRMT10AQ8TBZ6 339 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM37Q8WXS4 190 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SMPDL3AQ92484 453 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RPL3LQ92901 407 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 FAM131CQ96AQ9 280 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 PINX1Q96BK5 328 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANKRD9Q96BM1 317 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC25A36Q96CQ1 311 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RASD2Q96D21 266 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ELMO2Q96JJ3 720 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 C4orf45Q96LM5 186 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 RPRD1AQ96P16 312 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ERGIC2Q96RQ1 377 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 PSMB7Q99436 277 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 NPY6RQ99463 290 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 CCM2Q9BSQ5 444 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 NDUFAF3Q9BU61 184 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TM6SF2Q9BZW4 377 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRIM15Q9C019 465 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 CXXC4Q9H2H0 198 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ADNPQ9H2P0 1102 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 EGLN3Q9H6Z9 239 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GPN2Q9H9Y4 310 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms