RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 CRYBA2P53672 197 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 CDH12P55289 794 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 MAPRE2Q15555 327 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 NPTX1Q15818 432 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 TMEM108Q6UXF1 575 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 H1FNTQ75WM6 255 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-211ENST00000568586 ABHD12BQ7Z5M8 362 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-211ENST00000568586 SMAP2Q8WU79 429 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-211ENST00000568586 TAMM41Q96BW9 452 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 PERPQ96FX8 193 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 LINC00470Q9BZP3 86 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 GRIP2Q9C0E4 1043 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 SELENONQ9NZV5 590 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 SEC14L4Q9UDX3 406 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 AMDHD2Q9Y303 409 aa25.78■■□□□ 1.72
RAB40C-211ENST00000568586 M0R082 166 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 SLC22A2O15244 555 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 SOD3P08294 240 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 GRPRP30550 384 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 PGGHGQ32M88 737 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 KLHL17Q6TDP4 642 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 KDM8Q8N371 416 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 ANKK1Q8NFD2 765 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 OR6T1Q8NGN1 323 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 ZNF417Q8TAU3 575 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 C18orf12Q96KH6 178 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 ZNF317Q96PQ6 595 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-211ENST00000568586 ZNF587Q96SQ5 575 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-211ENST00000568586 EPYCQ99645 322 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 PCDHAC1Q9H158 963 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 LAMP3Q9UQV4 416 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 CORINQ9Y5Q5 1042 aa25.77■■□□□ 1.72
RAB40C-211ENST00000568586 M0R3H8 397 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 ABCD4O14678 606 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 OPN1SWP03999 348 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 ZNF43P17038 809 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 CD40P25942 277 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 GTF2E2P29084 291 aaKnown RBP25.76■■□□□ 1.71
RAB40C-211ENST00000568586 MDH1P40925 334 aaKnown RBP25.76■■□□□ 1.71
RAB40C-211ENST00000568586 RPS4XP62701 263 aaKnown RBP25.76■■□□□ 1.71
RAB40C-211ENST00000568586 LTBQ06643 244 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 RABL3Q5HYI8 236 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 C9orf135Q5VTT2 229 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 REP15Q6BDI9 236 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 YTHDF3Q7Z739 585 aaKnown RBP25.76■■□□□ 1.71
RAB40C-211ENST00000568586 SCAIQ8N9R8 606 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 MCHR1Q99705 422 aa25.76■■□□□ 1.71
RAB40C-211ENST00000568586 CISD1Q9NZ45 108 aaKnown RBP25.76■■□□□ 1.71
RAB40C-211ENST00000568586 MRASO14807 208 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 LYPD3O95274 346 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 BGLAPP02818 100 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 SLC25A3Q00325 362 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 VEZF1Q14119 521 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 NHLRC1Q6VVB1 395 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 OR4D11Q8NGI4 311 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 RASSF5Q8WWW0 418 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 OBP2BQ9NPH6 170 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 MAGED1Q9Y5V3 778 aaPredicted RBP25.75■■□□□ 1.71
RAB40C-211ENST00000568586 ZANQ9Y493 2812 aa25.75■■□□□ 1.71
RAB40C-211ENST00000568586 A0A1W2PR80 420 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 MS4A18H0YCH9 400 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 RPL36A-HNRNPH2H7BZ11 118 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 ATP8B1O43520 1251 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 CHP2O43745 196 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 ZNF83P51522 516 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 MS4A18Q3C1V0 323 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 MMEL1Q495T6 779 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 NIPAL3Q6P499 406 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 LINGO2Q7L985 606 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 BIVMQ86UB2 503 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 DTX2Q86UW9 622 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 SNX32Q86XE0 403 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 C10orf82Q8WW14 230 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 ZNF583Q96ND8 569 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 ECSITQ9BQ95 431 aa25.74■■□□□ 1.71
RAB40C-211ENST00000568586 ZNF587BE7ETH6 402 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 UPK3AO75631 287 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 CD8AP01732 235 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 PAX7P23759 505 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 CLDN17P56750 224 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 PRPS1P60891 318 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 LGALS3BPQ08380 585 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 PCYOX1LQ8NBM8 494 aa25.73■■□□□ 1.71
RAB40C-211ENST00000568586 MAGEE2Q8TD90 523 aaPredicted RBP25.73■■□□□ 1.71
RAB40C-211ENST00000568586 MRPL39Q9NYK5 338 aaKnown RBP25.73■■□□□ 1.71
RAB40C-211ENST00000568586 NSD1Q96L73 2696 aaPredicted RBP25.73■■□□□ 1.71
RAB40C-211ENST00000568586 LOC100653049A0A140TA62 436 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 TRAF3IP2O43734 574 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 KRT34O76011 436 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 THY1P04216 161 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 INHBBP09529 407 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 CDH11P55287 796 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 SF3A3Q12874 501 aaKnown RBP eCLIP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 ENTPD8Q5MY95 495 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 ERICH5Q6P6B1 374 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 TSPYL5Q86VY4 417 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 RBM45Q8IUH3 476 aaKnown RBP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 OR1K1Q8NGR3 316 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 BCL2L2Q92843 193 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 COX4I2Q96KJ9 171 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms