RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MDP1Q86V88 176 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ANKRD46Q86W74 232 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 EPHX4Q8IUS5 362 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ZNF440Q8IYI8 595 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 NEURL3Q96EH8 262 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 TRNT1Q96Q11 434 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ZNF416Q9BWM5 594 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 TXLNGYQ9BZA5 131 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 MRPL37Q9BZE1 423 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 SLC38A1Q9H2H9 487 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 SLC52A3Q9NQ40 469 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 NOP53Q9NZM5 478 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 MARCOQ9UEW3 520 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 PRDM4Q9UKN5 801 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 PCDHGB1Q9Y5G3 927 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 A0A0G2JMP0 313 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 A0A0X1KG70 313 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 PRSS51A0A1B0GVH4 220 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF503-AS2A6NEH8 195 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 HMGN4O00479 90 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 PPIHO43447 177 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 SLC43A1O75387 559 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 GSNP06396 782 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 IL7RP16871 459 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 TCN1P20061 433 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 RPS4Y1P22090 263 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 COL8A2P25067 703 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ALDH3A1P30838 453 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 CHI3L1P36222 383 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 CAPZA2P47755 286 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 CLDN17P56750 224 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 LMO4P61968 165 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 MYBPC1Q00872 1141 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 DEFA6Q01524 100 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 EMX2Q04743 252 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 MSMPQ1L6U9 139 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF311Q5JNZ3 666 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ANXA8L1Q5VT79 327 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 LRRC74BQ6ZQY2 392 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ZCCHC23Q6ZST2 131 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 C1QL2Q7Z5L3 287 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 C4orf33Q8N1A6 199 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 GPR137CQ8N3F9 429 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 RIBC1Q8N443 379 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 BPIFB2Q8N4F0 458 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 VPS37AQ8NEZ2 397 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 OR4M2Q8NGB6 313 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 SLC6A7Q99884 636 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 DPY30Q9C005 99 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 MTHFD2LQ9H903 347 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 PPCSQ9HAB8 311 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 G6PC2Q9NQR9 355 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF275Q9NSD4 429 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 ASIC5Q9NY37 505 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 NOX1Q9Y5S8 564 aa10.14□□□□□ -0.79
GTF3C1-209ENST00000568569 A0A096LPI6 279 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 SMIM23A6NLE4 172 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF432O94892 652 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 CPSF4O95639 269 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 BCL10O95999 233 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 AVPP01185 164 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 DBIP07108 87 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 TFPTP0C1Z6 253 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 FAM153BP0C7A2 387 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF43P17038 809 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 GLRXP35754 106 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 SERPINB5P36952 375 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ANXA11P50995 505 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 COPZ1P61923 177 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 RPS23P62266 143 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 UBA52P62987 128 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 FOXL1Q12952 345 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 BNIP2Q12982 314 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 SYPL1Q16563 259 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 WBP2NLQ6ICG8 309 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 IFT20Q8IY31 132 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 CADM2Q8N3J6 435 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ANKFN1Q8N957 763 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ZDHHC22Q8N966 263 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 NANPQ8TBE9 248 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 YIPF5Q969M3 257 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 SYT3Q9BQG1 590 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 SLC35A5Q9BS91 424 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 MECRQ9BV79 373 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 GPR35Q9HC97 309 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ESM1Q9NQ30 184 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 ZDHHC2Q9UIJ5 367 aa10.13□□□□□ -0.79
GTF3C1-209ENST00000568569 A0A0G2JK05 382 aa10.12□□□□□ -0.79
GTF3C1-209ENST00000568569 CDHR4A6H8M9 788 aa10.12□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF99A8MXY4 864 aaPredicted RBP10.12□□□□□ -0.79
GTF3C1-209ENST00000568569 J3QLI3 93 aa10.12□□□□□ -0.79
GTF3C1-209ENST00000568569 NPIPB7O75200 414 aa10.12□□□□□ -0.79
GTF3C1-209ENST00000568569 RP2O75695 350 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms