RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 C10orf53Q8N6V4 93 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 ICA1LQ8NDH6 482 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 OR4K5Q8NGD3 323 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 OR4C15Q8NGM1 316 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 PFN4Q8NHR9 129 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 CPT1CQ8TCG5 803 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SLC7A13Q8TCU3 470 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 TMEM239Q8WW34 195 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 DDIT4LQ96D03 193 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 KTI12Q96EK9 354 aaPredicted RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 ARL5BQ96KC2 179 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 HS6ST2Q96MM7 605 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 GPR137Q96N19 417 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 OR5B2Q96R09 309 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 TIMP4Q99727 224 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 BARD1Q99728 777 aaKnown RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 ANKRD19PQ9H560 264 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 C12orf10Q9HB07 376 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 NTN4Q9HB63 628 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 AGPAT4Q9NRZ5 378 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SPRR3Q9UBC9 169 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 TMCC3Q9ULS5 477 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SPIN1Q9Y657 262 aaPredicted RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 AP4B1Q9Y6B7 739 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 ZNF407Q9C0G0 2248 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 A0A0J9YW62 118 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 A0A1B0GVC2 190 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SH3PXD2BA1X283 911 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SAC3D1A6NKF1 404 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 GJE1A6NN92 205 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 TNFSF11O14788 317 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ZNF208O43345 1280 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 OR10H3O60404 316 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 AHSA1O95433 338 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 CH25HO95992 272 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ACTL6AO96019 429 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 PRB1P04280 392 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 IFI30P13284 250 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ANPEPP15144 967 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ZNF23P17027 643 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 FPR1P21462 350 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 PRKACGP22612 351 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 RBM34P42696 430 aaKnown RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 LHX2P50458 406 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 TDGF1P3P51864 188 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 HMGA2P52926 109 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SUCLG1P53597 346 aaKnown RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 OR2B6P58173 313 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 CRYZQ08257 329 aaKnown RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 C1orf140Q5VVS0 124 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 TEPPQ6URK8 271 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 NRMQ8IXM6 262 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 HS3ST5Q8IZT8 346 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 CELF2-AS1Q8N7Q2 184 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 LSM14AQ8ND56 463 aaKnown RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 OR9Q2Q8NGE9 314 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 OR5M9Q8NGP3 310 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 OR5K1Q8NHB7 308 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 PIGXQ8TBF5 258 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 GIPC3Q8TF64 312 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SLC25A43Q8WUT9 341 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 ACOT11Q8WXI4 607 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 TAAR8Q969N4 342 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SARAFQ96BY9 339 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 SLC25A36Q96CQ1 311 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 CENPNQ96H22 339 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 WDYHV1Q96HA8 205 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 KLHL15Q96M94 604 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 BBC3Q96PG8 261 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 EPYCQ99645 322 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 FUZQ9BT04 418 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 TMEM43Q9BTV4 400 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 POTEKPQ9BYX7 375 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 DCLRE1BQ9H816 532 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 MEPEQ9NQ76 525 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 C20orf141Q9NUB4 165 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ALKBH4Q9NXW9 302 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 PDP1Q9P0J1 537 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 NKX1-2Q9UD57 310 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 CAMK2AQ9UQM7 478 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 MED31Q9Y3C7 131 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 MAGED1Q9Y5V3 778 aaPredicted RBP6.93□□□□□ -1.3
SMG1-214ENST00000568038 DNAJC13O75165 2243 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 LOC400499M0QZD8 3231 aa6.93□□□□□ -1.3
SMG1-214ENST00000568038 ANKRD11Q6UB99 2663 aaPredicted RBP6.92□□□□□ -1.3
SMG1-214ENST00000568038 TRAV36DV7A0A075B6V5 113 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 ENO4A6NNW6 628 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 LRRN3E7EW58 273 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 PDLIM1O00151 329 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 SULT2B1O00204 365 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 AQP7O14520 342 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 CXCL13O43927 109 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 MGRN1O60291 552 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 NPIPB7O75200 414 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 OR7A10O76100 309 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 PLATP00750 562 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 BGLAPP02818 100 aa6.92□□□□□ -1.3
SMG1-214ENST00000568038 POU2F1P14859 743 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms