RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 MS4A18Q3C1V0 323 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 GTF2IRD2BQ6EKJ0 949 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF770Q6IQ21 691 aaPredicted RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 NHLRC1Q6VVB1 395 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 FAM214BQ7L5A3 538 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 NUFIP2Q7Z417 695 aaKnown RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 ZER1Q7Z7L7 766 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 TMEM179BQ7Z7N9 219 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 MRGPRGQ86SM5 289 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 GTF2IRD2Q86UP8 949 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 KDM8Q8N371 416 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 PYDC1Q8WXC3 89 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 STARD4Q96DR4 205 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 FAM46AQ96IP4 442 aaKnown RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 SF3B5Q9BWJ5 86 aaKnown RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 ASPNQ9BXN1 380 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 YY1AP1Q9H869 796 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 REEP1Q9H902 201 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 NTN4Q9HB63 628 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 FANCFQ9NPI8 374 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF629Q9UEG4 869 aaPredicted RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 RASD1Q9Y272 281 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 SAMHD1Q9Y3Z3 626 aaKnown RBP16■□□□□ 0.15
COMMD4-222ENST00000568034 AP4S1Q9Y587 144 aa16■□□□□ 0.15
COMMD4-222ENST00000568034 ENTPD5O75356 428 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 VAMP5O95183 116 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 CGAP01215 116 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 YES1P07947 543 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 AGAP20933 346 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 EDNRAP25101 427 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 CHRNB4P30926 498 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 SMSP52788 366 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 RPS4XP62701 263 aaKnown RBP15.99■□□□□ 0.15
COMMD4-222ENST00000568034 SIRPAP78324 504 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 PMS2P3Q13401 168 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 PGBD2Q6P3X8 592 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 TMPRSS11FQ6ZWK6 438 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 BTLAQ7Z6A9 289 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 EPHX4Q8IUS5 362 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 MCEMP1Q8IX19 187 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF808Q8N4W9 903 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-222ENST00000568034 ZIC4Q8N9L1 334 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 OR9K2Q8NGE7 335 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 OR9Q2Q8NGE9 314 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 TAS2R5Q9NYW4 299 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 DNAJB9Q9UBS3 223 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 FLVCR1Q9Y5Y0 555 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 U3KQV3 271 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 TENM4Q6N022 2769 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 SPTBN1Q01082 2364 aaKnown RBP15.99■□□□□ 0.15
COMMD4-222ENST00000568034 LRRK2Q5S007 2527 aa15.99■□□□□ 0.15
COMMD4-222ENST00000568034 LOC102725191A0A1B0GVB3 256 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 CLOCKO15516 846 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 TRAF3IP2O43734 574 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-222ENST00000568034 PLGP00747 810 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-222ENST00000568034 HLA-DOBP13765 273 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 BMP5P22003 454 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 UQCRC1P31930 480 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 OPRM1P35372 400 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 PUDPQ08623 228 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 ZP4Q12836 540 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 GK3PQ14409 553 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 ATP6AP1Q15904 470 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 HMBOX1Q6NT76 420 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 GPAT4Q86UL3 456 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 CNEP1R1Q8N9A8 125 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 OR13C2Q8NGS9 318 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 OR6K3Q8NGY3 331 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 LILRB4Q8NHJ6 448 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 ASB5Q8WWX0 329 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF775Q96BV0 537 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-222ENST00000568034 OXGR1Q96P68 337 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF385AQ96PM9 386 aaKnown RBP15.98■□□□□ 0.15
COMMD4-222ENST00000568034 COQ3Q9NZJ6 369 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 JKAMPQ9P055 326 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 C6orf203Q9P0P8 240 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-222ENST00000568034 TMCC3Q9ULS5 477 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 TMEM5Q9Y2B1 443 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 HIF3AQ9Y2N7 669 aa15.98■□□□□ 0.15
COMMD4-222ENST00000568034 CACNA1CQ13936 2221 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 EFCAB9A8MZ26 197 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 OR10H3O60404 316 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 CCNB2O95067 398 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 ZNF26P17031 533 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-222ENST00000568034 RPL18Q07020 188 aaKnown RBP15.97■□□□□ 0.15
COMMD4-222ENST00000568034 MICAQ29983 383 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 TMEM225Q6GV28 225 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 C1orf94Q6P1W5 598 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 XKRXQ6PP77 449 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 CREB3L2Q70SY1 520 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 RRM2BQ7LG56 351 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 NANOGNBQ7Z5D8 188 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 MOSPD2Q8NHP6 518 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 SSC4DQ8WTU2 575 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 LRTOMTQ8WZ04 291 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 TMEM45BQ96B21 275 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 TACO1Q9BSH4 297 aaKnown RBP15.97■□□□□ 0.15
COMMD4-222ENST00000568034 UCK2Q9BZX2 261 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 EMC9Q9Y3B6 208 aa15.97■□□□□ 0.15
COMMD4-222ENST00000568034 FREM1Q5H8C1 2179 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms