RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TEX37Q96LM6 180 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 CCDC115Q96NT0 180 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 ANKRD27Q96NW4 1050 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 MRPL37Q9BZE1 423 aaKnown RBP13.35□□□□□ -0.27
PALB2-205ENST00000567003 LINC00470Q9BZP3 86 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 GPR35Q9HC97 309 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 WDR91A4D1P6 747 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 CDHR4A6H8M9 788 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 CCDC154A6NI56 674 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 A8MVM7 634 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 B4DSR2 109 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 HPXP02790 462 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 PNMTP11086 282 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 COL8A2P25067 703 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 MAP2K6P52564 334 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 SH3BGRP55822 239 aaPredicted RBP13.34□□□□□ -0.27
PALB2-205ENST00000567003 GNA13Q14344 377 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 GSTA3Q16772 222 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 SMU1Q2TAY7 513 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 CEACAM16Q2WEN9 425 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 ATG16L1Q676U5 607 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 WBP2NLQ6ICG8 309 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 CLIP4Q8N3C7 705 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 VPS37AQ8NEZ2 397 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 TESCQ96BS2 214 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 MTHFD2LQ9H903 347 aaPredicted RBP13.34□□□□□ -0.27
PALB2-205ENST00000567003 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 TREM2Q9NZC2 230 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
PALB2-205ENST00000567003 TGP01266 2768 aa13.33□□□□□ -0.27
PALB2-205ENST00000567003 FTCDNL1E5RQL4 147 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 NPIPB7O75200 414 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 ZNF432O94892 652 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 VAMP5O95183 116 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 IL12AP29459 219 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 S100A3P33764 101 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 ALDH3B1P43353 468 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 SEC24CP53992 1094 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 UFM1P61960 85 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 HOXC5Q00444 222 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 RPS26P11Q5JNZ5 115 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 PHYHD1Q5SRE7 291 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 LRP11Q86VZ4 500 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 PEX5LQ8IYB4 626 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 ZNF440Q8IYI8 595 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 TMEM186Q96B77 213 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 ZNF317Q96PQ6 595 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 MYEF2Q9P2K5 600 aaKnown RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 B3GAT1Q9P2W7 334 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 BTNL2Q9UIR0 455 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 FBXO9Q9UK97 447 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 ZNF443Q9Y2A4 671 aaPredicted RBP13.33□□□□□ -0.28
PALB2-205ENST00000567003 CMAHPQ9Y471 501 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
PALB2-205ENST00000567003 A0A0A6YYJ9 748 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 E9PBE3 544 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SLCO1B7G3V0H7 640 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SLC43A1O75387 559 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 AHSA1O95433 338 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 HLA-HP01893 362 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 NUDT17P0C025 328 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 TFPTP0C1Z6 253 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 NCF2P19878 526 aaPredicted RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 PCMT1P22061 227 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 PAX7P23759 505 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 GPR6P46095 362 aaPredicted RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 COPZ1P61923 177 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 CHI3L2Q15782 390 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 LIN52Q52LA3 116 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 CARD17Q5XLA6 110 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SHQ1Q6PI26 577 aaKnown RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 ZNF621Q6ZSS3 439 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 GPR137CQ8N3F9 429 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 ZFAND2BQ8WV99 257 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 GCDHQ92947 438 aaPredicted RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 MRPL24Q96A35 216 aaKnown RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
PALB2-205ENST00000567003 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 PANX1Q96RD7 426 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 NUF2Q9BZD4 464 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 C20orf27Q9GZN8 174 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SLC6A13Q9NSD5 602 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 REV1Q9UBZ9 1251 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 SPEF1Q9Y4P9 236 aa13.32□□□□□ -0.28
PALB2-205ENST00000567003 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms