RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 NET1Q7Z628 596 aaPredicted RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 STON2Q8WXE9 905 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 OXGR1Q96P68 337 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 ALKBH3Q96Q83 286 aaPredicted RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 SELENONQ9NZV5 590 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 TESQ9UGI8 421 aaKnown RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 SONP18583 2426 aaKnown RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 A0A1B0GWA3 101 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 ATP6V1G2-DDX39BF2Z307 99 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 AIM2O14862 343 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 SERPINB7O75635 380 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 HTR2AP28223 471 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 SCARB2Q14108 478 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 ALG10BQ5I7T1 473 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 FAM91A1Q658Y4 838 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 HMBOX1Q6NT76 420 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 ULK3Q6PHR2 472 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 CLEC2AQ6UVW9 174 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 PRIMA1Q86XR5 153 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 C10orf111Q8N326 155 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 ANKK1Q8NFD2 765 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 MAGEE2Q8TD90 523 aaPredicted RBP17.62■□□□□ 0.41
CLN6-207ENST00000566347 KCNS3Q9BQ31 491 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 EVA1AQ9H8M9 152 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 INTS9Q9NV88 658 aaKnown RBP17.62■□□□□ 0.41
CLN6-207ENST00000566347 SLC13A4Q9UKG4 626 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 PMF1-BGLAPU3KQ54 211 aa17.62■□□□□ 0.41
CLN6-207ENST00000566347 TRAV36DV7A0A075B6V5 113 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 ARPC4-TTLL3A0A0A6YYG9 625 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 HMGB1P1B2RPK0 211 aaPredicted RBP17.61■□□□□ 0.41
CLN6-207ENST00000566347 UPK3AO75631 287 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 HOXB1P14653 301 aaPredicted RBP17.61■□□□□ 0.41
CLN6-207ENST00000566347 CLDN17P56750 224 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 LGALS3BPQ08380 585 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 C1DQ13901 141 aaKnown RBP17.61■□□□□ 0.41
CLN6-207ENST00000566347 MFSD13AQ14CX5 517 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 ANKRD16Q6P6B7 361 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 KDM8Q8N371 416 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 HIPK4Q8NE63 616 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 BCL2L2Q92843 193 aaPredicted RBP17.61■□□□□ 0.41
CLN6-207ENST00000566347 TAAR8Q969N4 342 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 SLC47A1Q96FL8 570 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 SLC38A2Q96QD8 506 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 RSPO3Q9BXY4 272 aaPredicted RBP17.61■□□□□ 0.41
CLN6-207ENST00000566347 IKZF5Q9H5V7 419 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 TMEM27Q9HBJ8 222 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 MOKQ9UQ07 419 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 ANGPT4Q9Y264 503 aa17.61■□□□□ 0.41
CLN6-207ENST00000566347 LOC102725191A0A1B0GVB3 256 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 RPL36A-HNRNPH2H7BZ11 118 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 M0R082 166 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 TLX2O43763 284 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 AKAP8O43823 692 aaKnown RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 CD5LO43866 347 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 TPST1O60507 370 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 SLC43A1O75387 559 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 CRLF1O75462 422 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 ZNF432O94892 652 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 RGS8P57771 180 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 ROR2Q01974 943 aaKnown RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 C3orf36Q3SXR2 165 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 DLEU7Q6UYE1 221 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 H1FNTQ75WM6 255 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 LINGO2Q7L985 606 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 COMTD1Q86VU5 262 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 ARMC8Q8IUR7 673 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 ADPRHL1Q8NDY3 354 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 OR10H5Q8NGA6 315 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 OR6S1Q8NH40 331 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 ZNF417Q8TAU3 575 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 ZNF587Q96SQ5 575 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 EPYCQ99645 322 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 CPPED1Q9BRF8 314 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 KATNB1Q9BVA0 655 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 B3GAT1Q9P2W7 334 aa17.6■□□□□ 0.41
CLN6-207ENST00000566347 LEF1Q9UJU2 399 aaPredicted RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 CHD3Q12873 2000 aaKnown RBP17.6■□□□□ 0.41
CLN6-207ENST00000566347 IGKV1D-42A0A075B6H8 117 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 IGHV4-30-2A0A087WSY4 118 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 IGHV1-18A0A0C4DH31 117 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 CRYAAP02489 173 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 GRPRP30550 384 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 ADRM1Q16186 407 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 RUNDC3AQ59EK9 446 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 RANBP3LQ86VV4 465 aaPredicted RBP17.59■□□□□ 0.41
CLN6-207ENST00000566347 GPR137CQ8N3F9 429 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 FAM169BQ8N8A8 192 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 CKAP2Q8WWK9 683 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 MAGEB18Q96M61 343 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 KLHL14Q9P2G3 628 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 CRNNQ9UBG3 495 aaPredicted RBP17.59■□□□□ 0.41
CLN6-207ENST00000566347 SEC14L4Q9UDX3 406 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 TRIM33Q9UPN9 1127 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 CORINQ9Y5Q5 1042 aa17.59■□□□□ 0.41
CLN6-207ENST00000566347 A0A087WUJ7 227 aa17.58■□□□□ 0.4
CLN6-207ENST00000566347 A0A0B4J2E0 115 aa17.58■□□□□ 0.4
CLN6-207ENST00000566347 A0A1B0GX12 115 aa17.58■□□□□ 0.4
CLN6-207ENST00000566347 CSF3P09919 207 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms