RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 A0A1W2PRQ8 180 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 TUBAL3A6NHL2 446 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ENO4A6NNW6 628 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 C16orf97H3BN30 126 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 NTF4P34130 210 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 KIR2DL3P43628 341 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 YAP1P46937 504 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 UGT2B15P54855 530 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 PUDPQ08623 228 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 FAM27E3Q08E93 113 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 DGCR6Q14129 220 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 P2RY6Q15077 328 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 IQCCQ4KMZ1 466 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 CREB3L2Q70SY1 520 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF100Q8IYN0 542 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 C10orf53Q8N6V4 93 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 PIK3C3Q8NEB9 887 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 OR5J2Q8NH18 312 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 LIPHQ8WWY8 451 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF775Q96BV0 537 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 CCDC124Q96CT7 223 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 DHRS1Q96LJ7 313 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 OR10A4Q9H209 315 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 NMNAT1Q9HAN9 279 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 IL1RAPQ9NPH3 570 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 NANSQ9NR45 359 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 RCE1Q9Y256 329 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 LRRN3E7EW58 273 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 KPNA4O00629 521 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 DNAJC8O75937 253 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ASAH2BP0C7U1 165 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 NQO1P15559 274 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF43P17038 809 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 MS4A2Q01362 244 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 TRAP1Q12931 704 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 EXOC3L2Q2M3D2 409 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 FBXW9Q5XUX1 488 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 PGM2L1Q6PCE3 622 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 CASP12Q6UXS9 341 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 CYP2R1Q6VVX0 501 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 STAC2Q6ZMT1 411 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 SLC46A3Q7Z3Q1 461 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 FAM222BQ8WU58 562 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 ACOT11Q8WXI4 607 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 MCUR1Q96AQ8 359 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 C14orf79Q96F83 325 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 CLPTM1LQ96KA5 538 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 V9GYQ6 96 aa18.65■□□□□ 0.58
SHCBP1-205ENST00000566016 FBN2P35556 2912 aa18.64■□□□□ 0.58
SHCBP1-205ENST00000566016 TCRBV5S2A0A599 114 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 PLPP3O14495 311 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 CH25HO95992 272 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 COX5AP20674 150 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 EDNRAP25101 427 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 PMS2P3Q13401 168 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 EPHX4Q8IUS5 362 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 RNF113BQ8IZP6 322 aaKnown RBP18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 PFN4Q8NHR9 129 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 DACH2Q96NX9 599 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 ZNF385AQ96PM9 386 aaKnown RBP18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 PIP5K1AQ99755 562 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 HDHD5Q9BXW7 423 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 MAGIXQ9H6Y5 334 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 RHCGQ9UBD6 479 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 NDRG3Q9UGV2 375 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 GPR52Q9Y2T5 361 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 NOX1Q9Y5S8 564 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 NAV2Q8IVL1 2488 aa18.64■□□□□ 0.57
SHCBP1-205ENST00000566016 PRR14LQ5THK1 2151 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 OR6C65A6NJZ3 312 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 MS4A18H0YCH9 400 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 hCG_2039718K7EN88 272 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 ACOT8O14734 319 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 TRAF3IP2O43734 574 aaPredicted RBP18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 STAMBPO95630 424 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 H1F0P07305 194 aaKnown RBP18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 PPP3CBP16298 524 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 CBLP22681 906 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 MS4A18Q3C1V0 323 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 PIWIL3Q7Z3Z3 882 aaKnown RBP18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 PXKQ7Z7A4 578 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 SGTBQ96EQ0 304 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 USB1Q9BQ65 265 aaKnown RBP18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 TRIM15Q9C019 465 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 C20orf141Q9NUB4 165 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 CRIM1Q9NZV1 1036 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 PRSS50Q9UI38 385 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 TESMINQ9Y4I5 508 aa18.63■□□□□ 0.57
SHCBP1-205ENST00000566016 HRNRQ86YZ3 2850 aaPredicted RBP18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 OR7A10O76100 309 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 GOSR1O95249 250 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 FABP3P05413 133 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 FUT4P22083 530 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 MAGEA2P43356 314 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 ZP4Q12836 540 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 ITGADQ13349 1161 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 AAED1Q7RTV5 226 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 ZNF295-AS1Q8N0V1 137 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 KDM8Q8N371 416 aa18.62■□□□□ 0.57
SHCBP1-205ENST00000566016 SLC7A13Q8TCU3 470 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms