RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 VAMP5O95183 116 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 NPR2P20594 1047 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 THBS4P35443 961 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 EVX1P49640 407 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 P2RY4P51582 365 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 CLDN8P56748 225 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 LGALS3BPQ08380 585 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 FUT5Q11128 374 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 TRIP10Q15642 601 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 OTUD3Q5T2D3 398 aaPredicted RBP11.03□□□□□ -0.64
RNF40-208ENST00000565995 ZCCHC24Q8N2G6 241 aaKnown RBP11.03□□□□□ -0.64
RNF40-208ENST00000565995 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 TMEM99Q8N816 258 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 FNDC5Q8NAU1 212 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 OR8J2Q8NGG1 315 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 ROPN1LQ96C74 230 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 SLC35G5Q96KT7 338 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 C1orf50Q9BV19 199 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 LINC00470Q9BZP3 86 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 VWFP04275 2813 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 PRAMEF27A3QJZ7 478 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ZNF587BE7ETH6 402 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 AP3D1O14617 1153 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 GPIP06744 558 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 OR12D1P0DN82 309 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 IFNGR1P15260 489 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CBR1P16152 277 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 LBPP18428 481 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CDH2P19022 906 aaPredicted RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 CCNA2P20248 432 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 TACR3P29371 465 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 SH3BGRP55822 239 aaPredicted RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 HILS1P60008 231 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 MAD2L1Q13257 205 aaPredicted RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 GSTA3Q16772 222 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 SMU1Q2TAY7 513 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 PRR31Q5SQ13 230 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ATAD3BQ5T9A4 648 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CREB3L2Q70SY1 520 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 LINGO2Q7L985 606 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 GLCCI1Q86VQ1 547 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CLECL1Q8IZS7 167 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 IL17RDQ8NFM7 739 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ZNF418Q8TF45 676 aaPredicted RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 C10orf82Q8WW14 230 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 XAGE5Q8WWM1 108 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 CNOT9Q92600 299 aaKnown RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 OR52B2Q96RD2 323 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
RNF40-208ENST00000565995 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ASIC5Q9NY37 505 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 TRIM33Q9UPN9 1127 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 TANC2Q9HCD6 1990 aa11.02□□□□□ -0.65
RNF40-208ENST00000565995 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 NR5A2O00482 541 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 AKR7A3O95154 331 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 LGI1O95970 557 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
RNF40-208ENST00000565995 RPS4Y1P22090 263 aaKnown RBP11.01□□□□□ -0.65
RNF40-208ENST00000565995 UQCRC2P22695 453 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 STX1BP61266 288 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 CEACAM7Q14002 265 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 ADRM1Q16186 407 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 SAXO2Q658L1 398 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 RINLQ6ZS11 566 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 MYPOPQ86VE0 399 aaPredicted RBP11.01□□□□□ -0.65
RNF40-208ENST00000565995 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 SVOPLQ8N434 492 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
RNF40-208ENST00000565995 TMEM186Q96B77 213 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 SEC61A2Q9H9S3 476 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 PCDHB10Q9UN67 800 aa11.01□□□□□ -0.65
RNF40-208ENST00000565995 CMYA5Q8N3K9 4069 aa11□□□□□ -0.65
RNF40-208ENST00000565995 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
RNF40-208ENST00000565995 AGAP5A6NIR3 686 aa11□□□□□ -0.65
RNF40-208ENST00000565995 TRIM77I1YAP6 450 aa11□□□□□ -0.65
RNF40-208ENST00000565995 UBDO15205 165 aa11□□□□□ -0.65
RNF40-208ENST00000565995 ZNF432O94892 652 aa11□□□□□ -0.65
RNF40-208ENST00000565995 G6PDP11413 515 aa11□□□□□ -0.65
RNF40-208ENST00000565995 SOAT1P35610 550 aa11□□□□□ -0.65
RNF40-208ENST00000565995 ARR3P36575 388 aa11□□□□□ -0.65
RNF40-208ENST00000565995 LIMS1P48059 325 aa11□□□□□ -0.65
RNF40-208ENST00000565995 SELENOPP49908 381 aa11□□□□□ -0.65
RNF40-208ENST00000565995 ACTG1P63261 375 aa11□□□□□ -0.65
RNF40-208ENST00000565995 EMX2Q04743 252 aa11□□□□□ -0.65
RNF40-208ENST00000565995 EPS8Q12929 822 aa11□□□□□ -0.65
RNF40-208ENST00000565995 ELFN2Q5R3F8 820 aa11□□□□□ -0.65
RNF40-208ENST00000565995 TMEM225Q6GV28 225 aa11□□□□□ -0.65
RNF40-208ENST00000565995 OR4F3Q6IEY1 312 aa11□□□□□ -0.65
RNF40-208ENST00000565995 VHLLQ6RSH7 139 aa11□□□□□ -0.65
RNF40-208ENST00000565995 PIGWQ7Z7B1 504 aa11□□□□□ -0.65
RNF40-208ENST00000565995 PEG10Q86TG7 708 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms