RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ANKRD10Q9NXR5 420 aa12.63□□□□□ -0.39
CX3CL1-204ENST00000565912 ADAM29Q9UKF5 820 aa12.63□□□□□ -0.39
CX3CL1-204ENST00000565912 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
CX3CL1-204ENST00000565912 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 UTS2O95399 124 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF91Q05481 1191 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 GPR19Q15760 415 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 FXNQ16595 210 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TAZQ16635 292 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TM7SF3Q9NS93 570 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SLAMF8Q9P0V8 285 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 HCRTR1O43613 425 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 UBBP0CG47 229 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 UBCP0CG48 685 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TNFSF8P32971 234 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 THBS3P49746 956 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 HES1Q14469 280 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 KCNIP4Q6PIL6 250 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 PAPD4Q6PIY7 484 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 FAM174AQ8TBP5 190 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 EMCNQ9ULC0 261 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 MRPS28Q9Y2Q9 187 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 NXPH2O95156 264 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SNRPBP14678 240 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ERVFC1P60507 584 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SLC14A2Q15849 920 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 MED25Q71SY5 747 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 RNF113BQ8IZP6 322 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF436Q9C0F3 470 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CSNK1G1Q9HCP0 422 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 C1GALT1Q9NS00 363 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 K7EPK0 472 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 RFXAPO00287 272 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 MAKP20794 623 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ARL16Q0P5N6 197 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SMN1Q16637 294 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 C18orf63Q68DL7 685 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TBPL2Q6SJ96 375 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ZC3HAV1LQ96H79 300 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF597Q96LX8 424 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 PIGQQ9BRB3 760 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SLC19A3Q9BZV2 496 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 hCG_1809904A0A1W2PP81 198 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 A0A1W2PPE2 198 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 A0A1W2PR64 198 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 A0A1W2PRV1 198 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CACNG3O60359 315 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 TPOP07202 933 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 ATXN1LP0C7T5 689 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 BCKDHBP21953 392 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 BAXQ07812 192 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 MISPQ8IVT2 679 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 SCCPDHQ8NBX0 429 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 C12orf49Q9H741 205 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 CCL26Q9Y258 94 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 USP3Q9Y6I4 520 aa12.62□□□□□ -0.39
CX3CL1-204ENST00000565912 FZD7O75084 574 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 PRKRAO75569 313 aaKnown RBP12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 HTR2CP28335 458 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 C17orf67Q0P5P2 114 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 RFLNAQ6ZTI6 216 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 TXN2Q99757 166 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 HBMQ6B0K9 141 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF813Q6ZN06 617 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 PDLIM5Q96HC4 596 aaKnown RBP12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 NMNAT3Q96T66 252 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 TXLNGYQ9BZA5 131 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 TRAV36DV7A0A075B6V5 113 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF814B7Z6K7 855 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 P2RY10O00398 339 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 SCAF4O95104 1147 aaKnown RBP12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 EDN1P05305 212 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 SERPINF1P36955 418 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 CAMK2BQ13554 666 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 TMEM178AQ8NBL3 297 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 OR56B4Q8NH76 319 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 SLC38A5Q8WUX1 472 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 GIMAP1Q8WWP7 306 aa12.61□□□□□ -0.39
CX3CL1-204ENST00000565912 UCN3Q969E3 161 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms