RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 KLHL9Q9P2J3 617 aa23.13■■□□□ 1.29
NME3-208ENST00000565379 SAMHD1Q9Y3Z3 626 aaKnown RBP23.13■■□□□ 1.29
NME3-208ENST00000565379 F8P00451 2351 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 A0A0G2JNJ9 132 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 TRBV4-1A0A0J9YWV2 114 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 AQP7P3A6NL99 342 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 HSPB2A8KAH6 182 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 SMAD9O15198 467 aaKnown RBP23.12■■□□□ 1.29
NME3-208ENST00000565379 CLOCKO15516 846 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 CH25HO95992 272 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 HIST1H2ABP04908 130 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 SSTR2P30874 369 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 CEACAM8P31997 349 aaPredicted RBP23.12■■□□□ 1.29
NME3-208ENST00000565379 HSPB2Q16082 182 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 OTUD3Q5T2D3 398 aaPredicted RBP23.12■■□□□ 1.29
NME3-208ENST00000565379 SEM1Q6ZVN7 128 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 H1FNTQ75WM6 255 aaPredicted RBP23.12■■□□□ 1.29
NME3-208ENST00000565379 HIST3H2AQ7L7L0 130 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 OR4K5Q8NGD3 323 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 ASB5Q8WWX0 329 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 HIST1H2ACQ93077 130 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 SF3B5Q9BWJ5 86 aaKnown RBP23.12■■□□□ 1.29
NME3-208ENST00000565379 Q9UFV3 132 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 RASD1Q9Y272 281 aa23.12■■□□□ 1.29
NME3-208ENST00000565379 OR7A10O76100 309 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 IFI30P13284 250 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 GRPRP30550 384 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 ARHGDIAP52565 204 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 EXOC3L2Q2M3D2 409 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 ANKDD1AQ495B1 522 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 ABLIM2Q6H8Q1 611 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 TMPRSS11FQ6ZWK6 438 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 C9orf106Q8NAJ2 232 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 OR4C15Q8NGM1 316 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 OR5J2Q8NH18 312 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 ROBO4Q8WZ75 1007 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 DNAJA3Q96EY1 480 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 GMPPAQ96IJ6 420 aaPredicted RBP23.11■■□□□ 1.29
NME3-208ENST00000565379 BDH2Q9BUT1 245 aa23.11■■□□□ 1.29
NME3-208ENST00000565379 KIAA1549Q9HCM3 1950 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 SPG11Q96JI7 2443 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 TIPRLO75663 272 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 AQP8O94778 261 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 CCNB2O95067 398 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 AKR7A3O95154 331 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 PLGP00747 810 aaPredicted RBP23.1■■□□□ 1.29
NME3-208ENST00000565379 FUT1P19526 365 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 FUT4P22083 530 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 DNAJA1P31689 397 aaKnown RBP23.1■■□□□ 1.29
NME3-208ENST00000565379 SLC9A3P48764 834 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 LTBQ06643 244 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 ATP6AP1Q15904 470 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 TMEM225Q6GV28 225 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 TBPL2Q6SJ96 375 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 STMN2Q93045 179 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 MOGAT1Q96PD6 335 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 SPOCK3Q9BQ16 436 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 C20orf141Q9NUB4 165 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 EMC3Q9P0I2 261 aa23.1■■□□□ 1.29
NME3-208ENST00000565379 LOC102725191A0A1B0GVB3 256 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 M0R082 166 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 GPR171O14626 319 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 OR10H3O60404 316 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 ASAH2BP0C7U1 165 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 IGFBP2P18065 325 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 PTNP21246 168 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 SLC16A1P53985 500 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 RASGEF1BQ0VAM2 473 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 PMS2P3Q13401 168 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 SEC23BQ15437 767 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 ZNF771Q7L3S4 317 aaPredicted RBP23.09■■□□□ 1.29
NME3-208ENST00000565379 SLC46A3Q7Z3Q1 461 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 TMEM99Q8N816 258 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 ZNF417Q8TAU3 575 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 PYDC1Q8WXC3 89 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 NRBF2Q96F24 287 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 ZNF587Q96SQ5 575 aaPredicted RBP23.09■■□□□ 1.29
NME3-208ENST00000565379 BCO1Q9HAY6 547 aa23.09■■□□□ 1.29
NME3-208ENST00000565379 ANKRD17O75179 2603 aaKnown RBP23.08■■□□□ 1.29
NME3-208ENST00000565379 CELSR1Q9NYQ6 3014 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 IGKV3D-15A0A087WSY6 115 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 IGHV3-15A0A0B4J1V0 119 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 ARRDC5A6NEK1 342 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 ZNF724A8MTY0 619 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 PIP5K1CO60331 668 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 SS18L1O75177 396 aaPredicted RBP23.08■■□□□ 1.29
NME3-208ENST00000565379 ENTPD5O75356 428 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 E2F6O75461 281 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 OR6A2O95222 327 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 IL18BPO95998 194 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 TMIGD3P0DMS9 266 aaPredicted RBP23.08■■□□□ 1.29
NME3-208ENST00000565379 CTSSP25774 331 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 OMPP47874 163 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 POU4F3Q15319 338 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 TAF11Q15544 211 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 MICAQ29983 383 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 SFXN3Q9BWM7 321 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 FANCFQ9NPI8 374 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 KCNJ16Q9NPI9 418 aa23.08■■□□□ 1.29
NME3-208ENST00000565379 ZNF629Q9UEG4 869 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms