RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TMEM204Q9BSN7 226 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 PARPBPQ9NWS1 579 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 TAS2R16Q9NYV7 291 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 GMPR2Q9P2T1 348 aaKnown RBP12□□□□□ -0.49
VPS9D1-204ENST00000565023 SEC14L4Q9UDX3 406 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 ACANP16112 2415 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 M0R1B8 84 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 M0R3H8 397 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ITGA5P08648 1049 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 PNMTP11086 282 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 PTH2RP49190 550 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 GSK3BP49841 420 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 LGALS3BPQ08380 585 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 GABRA6Q16445 453 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ALG10BQ5I7T1 473 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 NIPAL3Q6P499 406 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 SEZ6L2Q6UXD5 910 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF611Q8N823 705 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 LILRB1Q8NHL6 650 aaPredicted RBP11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 VANGL1Q8TAA9 524 aaPredicted RBP11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 STK35Q8TDR2 534 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 RASSF5Q8WWW0 418 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 FBXW5Q969U6 566 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 PIP5K1AQ99755 562 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ARHGDIGQ99819 225 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 SMR3AQ99954 134 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 TRIM2Q9C040 744 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ALG2Q9H553 416 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM27Q9HBJ8 222 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 SPAG4Q9NPE6 437 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 SELENONQ9NZV5 590 aa11.99□□□□□ -0.49
VPS9D1-204ENST00000565023 ABCD4O14678 606 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 TPST2O60704 377 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 NPIPB7O75200 414 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 KDELR2P33947 212 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 CDKN1AP38936 164 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 SELENOPP49908 381 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 MNAT1P51948 309 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 CDH11P55287 796 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 EGR4Q05215 589 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 SPOCK1Q08629 439 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 OR1Q1Q15612 314 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 NRF1Q16656 503 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 PGAM4Q8N0Y7 254 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 C10orf53Q8N6V4 93 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 ZIC4Q8N9L1 334 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 MFSD8Q8NHS3 518 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC26A7Q8TE54 656 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 TAAR8Q969N4 342 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 NSL1Q96IY1 281 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 ALKBH3Q96Q83 286 aaPredicted RBP11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 PTDSS2Q9BVG9 487 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 SF3B5Q9BWJ5 86 aaKnown RBP11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 SLCO5A1Q9H2Y9 848 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 CXorf56Q9H5V9 222 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 C12orf10Q9HB07 376 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 MALT1Q9UDY8 824 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 TESQ9UGI8 421 aaKnown RBP11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 POU2F3Q9UKI9 436 aa11.98□□□□□ -0.49
VPS9D1-204ENST00000565023 TRIM64A6NGJ6 449 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 TRIM64BA6NI03 449 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 H7C1Q1 480 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 M0R082 166 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 FMO6PO60774 539 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 IFNA14P01570 189 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SOD3P08294 240 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 GRPRP30550 384 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 P2RY4P51582 365 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 ATP5J2P56134 94 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 CLDN17P56750 224 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 RPS4XP62701 263 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 C1DQ13901 141 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 NPTX1Q15818 432 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF672Q499Z4 452 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 C6orf89Q6UWU4 347 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 CREB3L2Q70SY1 520 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 P2RY8Q86VZ1 359 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF417Q8TAU3 575 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 DNAJA4Q8WW22 397 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 GTPBP3Q969Y2 492 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM45BQ96B21 275 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC47A1Q96FL8 570 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF587Q96SQ5 575 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 MCHR1Q99705 422 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 KCTD14Q9BQ13 255 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 NDE1Q9NXR1 346 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 CISD1Q9NZ45 108 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 BAG5Q9UL15 447 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC25A15Q9Y619 301 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms