RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ULK3Q6PHR2 472 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 DHRS4L2Q6PKH6 230 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC2A7Q6PXP3 512 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 B3GLCTQ6Y288 498 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 OR4F15Q8NGB8 312 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 FAM168AQ92567 244 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC38A4Q969I6 547 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC25A36Q96CQ1 311 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC38A2Q96QD8 506 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 ZNF607Q96SK3 696 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 RABEP2Q9H5N1 569 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 TMEM160Q9NX00 188 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SELENONQ9NZV5 590 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 TRAV36DV7A0A075B6V5 113 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 IGHV4-30-2A0A087WSY4 118 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 EVPLLA8MZ36 301 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 B9A039 149 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 NDUFS8O00217 210 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC43A1O75387 559 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 ZNF432O94892 652 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 LGI1O95970 557 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 NUDT7P0C024 238 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 ARAFP10398 606 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 HOXB9P17482 250 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 GPX2P18283 190 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 CDH2P19022 906 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 PTNP21246 168 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC6A2P23975 617 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SERPINF1P36955 418 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 RPS5P46782 204 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 IDH3AP50213 366 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 ATP4BP51164 291 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 VLDLRP98155 873 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC25A3Q00325 362 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 CDK6Q00534 326 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 C1DQ13901 141 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 HIKESHIQ53FT3 197 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 GCNT6Q5T4J0 391 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 FAM69AQ5T7M9 428 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 H1FNTQ75WM6 255 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 FUNDC1Q8IVP5 155 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 ADPRHL1Q8NDY3 354 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 STON2Q8WXE9 905 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 MAL2Q969L2 176 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SPDL1Q96EA4 605 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 KTI12Q96EK9 354 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC47A1Q96FL8 570 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 EPYCQ99645 322 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 TMEM38AQ9H6F2 299 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 TMEM27Q9HBJ8 222 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 MYOZ1Q9NP98 299 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 MOKQ9UQ07 419 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 CORINQ9Y5Q5 1042 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 CR1P17927 2039 aa10.63□□□□□ -0.71
GTF3C1-204ENST00000564664 RTTNQ86VV8 2226 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 A0A096LNT2 108 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 IGHV1-18A0A0C4DH31 117 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 UPK3AO75631 287 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 IGLV1-44P01699 117 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 CBR1P16152 277 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 CLDN17P56750 224 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SNRPD2P62316 118 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 EFNB3Q15768 340 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 MST1LQ2TV78 715 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 ALG10BQ5I7T1 473 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SWT1Q5T5J6 900 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SCAIQ8N9R8 606 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 ZNF540Q8NDQ6 660 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 PIK3C3Q8NEB9 887 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 C10orf105Q8TEF2 133 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 LRR1Q96L50 414 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 MDFIQ99750 246 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC52A3Q9NQ40 469 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC25A37Q9NYZ2 338 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 TESQ9UGI8 421 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 SLC13A4Q9UKG4 626 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 ADAM21Q9UKJ8 722 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 FKBP7Q9Y680 259 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 DNHD1Q96M86 4753 aa10.62□□□□□ -0.71
GTF3C1-204ENST00000564664 A0A087WUJ7 227 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 A0A1B0GWA3 101 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 ATP6V1G2-DDX39BF2Z307 99 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 RRP9O43818 475 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 IGKV3-15P01624 115 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 USF1P22415 310 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 ARR3P36575 388 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 PDLIM4P50479 330 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 HOXC5Q00444 222 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 ROR2Q01974 943 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 NAAAQ02083 359 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 SQLEQ14534 574 aa10.61□□□□□ -0.71
GTF3C1-204ENST00000564664 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms