RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 SIAH2O43255 324 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 DCTN3O75935 186 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 HIST1H2ABP04908 130 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 CDH2P19022 906 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-206ENST00000564557 COX5AP20674 150 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 PTNP21246 168 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 PRDX6P30041 224 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 NTF4P34130 210 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 ACKR1Q16570 336 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 CYBRD1Q53TN4 286 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 TSPO2Q5TGU0 170 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 KLHL17Q6TDP4 642 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 KLHL24Q6TFL4 600 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 HACD2Q6Y1H2 254 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-206ENST00000564557 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 HIST3H2AQ7L7L0 130 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 TREML1Q86YW5 311 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 UEVLDQ8IX04 471 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 SLC15A3Q8IY34 581 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 HIST1H2ACQ93077 130 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 PIGTQ969N2 578 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 LRRC37BQ96QE4 947 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 FOXC2Q99958 501 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 CMTM6Q9NX76 183 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 SLC7A7Q9UM01 511 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 USP22Q9UPT9 525 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 AKAP6Q13023 2319 aa12.05□□□□□ -0.48
CNOT1-206ENST00000564557 ANKRD17O75179 2603 aaKnown RBP12.05□□□□□ -0.48
CNOT1-206ENST00000564557 FBN2P35556 2912 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 DCHS2Q6V1P9 2916 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 SLC43A1O75387 559 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 ATE1O95260 518 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 MT-ATP6P00846 226 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 UMPSP11172 480 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 AHCYP23526 432 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 MPGP29372 298 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 PSME3P61289 254 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 SELENOWP63302 87 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-206ENST00000564557 NPTX1Q15818 432 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 DEFB113Q30KQ7 82 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 HMBOX1Q6NT76 420 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 SCAIQ8N9R8 606 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 OR4D11Q8NGI4 311 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 OR52N5Q8NH56 324 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 SLC41A3Q96GZ6 507 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 CCL19Q99731 98 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 KCTD14Q9BQ13 255 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-206ENST00000564557 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
CNOT1-206ENST00000564557 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
CNOT1-206ENST00000564557 MYLK2Q9H1R3 596 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 ALG2Q9H553 416 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
CNOT1-206ENST00000564557 POLQO75417 2590 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 A0A1W2PPR1 153 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 CXCR6O00574 342 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 KPNA4O00629 521 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-206ENST00000564557 SERPINI2O75830 405 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 ZNF682O95780 498 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 WNT11O96014 354 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 BGLAPP02818 100 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 OR1E2P47887 323 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 SELENOPP49908 381 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 P2RY4P51582 365 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 GABRA6Q16445 453 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 NCMAPQ5T1S8 102 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 TMEM108Q6UXF1 575 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 FKBP9P1Q75LS8 142 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 EPHX4Q8IUS5 362 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 GPR137CQ8N3F9 429 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 ADPRHL1Q8NDY3 354 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 C1orf162Q8NEQ5 155 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-206ENST00000564557 OR5J2Q8NH18 312 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 FAM162AQ96A26 154 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 MBD6Q96DN6 1003 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 MUS81Q96NY9 551 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 ALPK1Q96QP1 1244 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 NANSQ9NR45 359 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-206ENST00000564557 MRPL39Q9NYK5 338 aaKnown RBP12.03□□□□□ -0.48
CNOT1-206ENST00000564557 SEC14L4Q9UDX3 406 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 RCE1Q9Y256 329 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
CNOT1-206ENST00000564557 MAGED1Q9Y5V3 778 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-206ENST00000564557 A0A1W2PR80 420 aa12.02□□□□□ -0.49
CNOT1-206ENST00000564557 NME4O00746 187 aa12.02□□□□□ -0.49
CNOT1-206ENST00000564557 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-206ENST00000564557 SMPD2O60906 423 aa12.02□□□□□ -0.49
CNOT1-206ENST00000564557 OR5F1O95221 314 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms