RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CSF3P09919 207 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 GPX2P18283 190 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 RPS5P46782 204 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 ATP4BP51164 291 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 HOXC5Q00444 222 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 GCNT6Q5T4J0 391 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 FAM69AQ5T7M9 428 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 FAM91A1Q658Y4 838 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 REEP3Q6NUK4 255 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 NIPAL3Q6P499 406 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 ANKRD16Q6P6B7 361 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 C10orf111Q8N326 155 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 OR6S1Q8NH40 331 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 SPDL1Q96EA4 605 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 OXGR1Q96P68 337 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC38A2Q96QD8 506 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 TNFRSF13CQ96RJ3 184 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 SPATA5L1Q9BVQ7 753 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 NELFAQ9H3P2 528 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 SLCO1B3Q9NPD5 702 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 MOKQ9UQ07 419 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 PMF1-BGLAPU3KQ54 211 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 FBN1P35555 2871 aaKnown RBP15□□□□□ -0.01
VPS9D1-203ENST00000563798 ALPK2Q86TB3 2170 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 IGKV1D-42A0A075B6H8 117 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 A0A1B0GWA3 101 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 F12P00748 615 aaPredicted RBP15□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF43P17038 809 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 CDH2P19022 906 aaPredicted RBP15□□□□□ -0.01
VPS9D1-203ENST00000563798 HTR2AP28223 471 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 VLDLRP98155 873 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 CDK6Q00534 326 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 LGALS3BPQ08380 585 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 PAGE3Q5JUK9 113 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 COMTD1Q86VU5 262 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 KRT73Q86Y46 540 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF525Q8N782 197 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 ADPRHL1Q8NDY3 354 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 NFKBIDQ8NI38 313 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 LRRC8CQ8TDW0 803 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 C10orf105Q8TEF2 133 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 STON2Q8WXE9 905 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 PROX1Q92786 737 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC38A4Q969I6 547 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 TAAR8Q969N4 342 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC25A36Q96CQ1 311 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 ALKBH3Q96Q83 286 aaPredicted RBP15□□□□□ -0.01
VPS9D1-203ENST00000563798 EBF4Q9BQW3 602 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 EVA1AQ9H8M9 152 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 VAPAQ9P0L0 249 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 RPS6KB2Q9UBS0 482 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 CORO2BQ9UQ03 480 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 ATRQ13535 2644 aa15□□□□□ -0.01
VPS9D1-203ENST00000563798 HEATR1Q9H583 2144 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 TRAV36DV7A0A075B6V5 113 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 PRORSD1PA6NEY8 169 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 AIM2O14862 343 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 GPRIN2O60269 458 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 PDE5AO76074 875 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 IGKV3-15P01624 115 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 UBE2NP61088 152 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 TMEM249Q2WGJ8 235 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 HMBOX1Q6NT76 420 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 ULK3Q6PHR2 472 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 H1FNTQ75WM6 255 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 KDM8Q8N371 416 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 BHLHE22Q8NFJ8 381 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 SPATA3Q8NHX4 192 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 FAM168AQ92567 244 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC41A3Q96GZ6 507 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 YAE1D1Q9NRH1 226 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 CCDC167Q9P0B6 97 aa14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 TESQ9UGI8 421 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-203ENST00000563798 A0A087WUJ7 227 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 A8MV72 311 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 TPST1O60507 370 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC43A1O75387 559 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 CRYAAP02489 173 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 GTF2E2P29084 291 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 AQP5P55064 265 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 CLDN17P56750 224 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 ROR2Q01974 943 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 NAAAQ02083 359 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 MFSD13AQ14CX5 517 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 EFNB3Q15768 340 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 ADRM1Q16186 407 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 ALG10BQ5I7T1 473 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 C6orf52Q5T4I8 152 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 DLEU7Q6UYE1 221 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 NHLRC1Q6VVB1 395 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 CXXC5Q7LFL8 322 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 CCDC36Q8IYA8 594 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 NANOS1Q8WY41 292 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC47A1Q96FL8 570 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 ATP6V1G3Q96LB4 118 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 IKZF5Q9H5V7 419 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 CA10Q9NS85 328 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 TMEM160Q9NX00 188 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 KLHL14Q9P2G3 628 aa14.98□□□□□ -0.01
VPS9D1-203ENST00000563798 SEC14L4Q9UDX3 406 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms