RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MGAT5Q09328 741 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 HABP2Q14520 560 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 LTB4RQ15722 352 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 DECR1Q16698 335 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 CYP20A1Q6UW02 462 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 ETV3LQ6ZN32 361 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 FRA10AC1Q70Z53 315 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 NUDT13Q86X67 352 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 Q8N2B8 174 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 TCAIMQ8N3R3 496 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 ERP27Q96DN0 273 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 CFAP36Q96G28 342 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 TSPAN32Q96QS1 320 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 OR5B2Q96R09 309 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 DCLRE1CQ96SD1 692 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 RMND5AQ9H871 391 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 RAB18Q9NP72 206 aa8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 ZNF256Q9Y2P7 627 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 TSSC4Q9Y5U2 329 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-204ENST00000563790 VPS13BQ7Z7G8 4022 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 A0A096LPE4 126 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 SLC22A23A1A5C7 686 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 MYO1GB0I1T2 1018 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 PGRMC1O00264 195 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 TM9SF1O15321 606 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 H6PDO95479 791 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 IGF2P01344 180 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 PIK3CBP42338 1070 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 GPX6P59796 221 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 SELENOVP59797 346 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 BTG1P62324 171 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 CSNK2A1P68400 391 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 PAGE2BQ5JRK9 111 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 GKAP1Q5VSY0 366 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 GRHL2Q6ISB3 625 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 MED27Q6P2C8 311 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 CRIP3Q6Q6R5 217 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 DDIASQ8IXT1 998 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 CPEB3Q8NE35 698 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 OR7G2Q8NG99 324 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 LHX4Q969G2 390 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 LRRC39Q96DD0 335 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 SH3YL1Q96HL8 342 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 PBKQ96KB5 322 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 MTERF1Q99551 399 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 GPR22Q99680 433 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF702PQ9H963 129 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 CNOT10Q9H9A5 744 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 SLCO1C1Q9NYB5 712 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 CAB39Q9Y376 341 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 FLVCR1Q9Y5Y0 555 aa8.64□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF503-AS2A6NEH8 195 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF879B4DU55 563 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 SULT2B1O00204 365 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 CCNT2O60583 730 aaKnown RBP8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 DNAJA2O60884 412 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ERAL1O75616 437 aaKnown RBP8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 BCKDHAP12694 445 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 CSNK2A2P19784 350 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 SERPINB1P30740 379 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 PRIM2P49643 509 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 KLF3P57682 345 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 TMPPEQ6ZT21 453 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 CCDC121Q6ZUS5 278 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ISCA2Q86U28 154 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ZBED8Q8IZ13 594 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF675Q8TD23 568 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 TSEN15Q8WW01 171 aaKnown RBP8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 PLEKHA8Q96JA3 519 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF347Q96SE7 839 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 CENPKQ9BS16 269 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 ST6GALNAC5Q9BVH7 336 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 SEMA6AQ9H2E6 1030 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 SELENONQ9NZV5 590 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 CES1P1Q9UKY3 287 aa8.63□□□□□ -1.03
HDGFL3-204ENST00000563790 H0YIV9 168 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 ENSAO43768 121 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 PEX14O75381 377 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 PCNAP12004 261 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 ZNF250P15622 560 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 TYK2P29597 1187 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 CRHR1P34998 444 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 PSMD4P55036 377 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 HNRNPA0Q13151 305 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 CUL3Q13618 768 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 TRADDQ15628 312 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 HIST2H2ACQ16777 129 aaPredicted RBP8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 ERCC6LQ2NKX8 1250 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 TRMT5Q32P41 509 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 HIST2H2AA3Q6FI13 130 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 MDP1Q86V88 176 aa8.62□□□□□ -1.03
HDGFL3-204ENST00000563790 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms