RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ZNF432O94892 652 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 WNT11O96014 354 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 MT-ATP6P00846 226 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 SOD3P08294 240 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 ZNF43P17038 809 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 CD40P25942 277 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 AQP1P29972 269 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 GZMMP51124 257 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 CDH11P55287 796 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 PRPS1P60891 318 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 KLF10Q13118 480 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 VEZF1Q14119 521 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 DUSP7Q16829 419 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 VMACQ2NL98 169 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 PGGHGQ32M88 737 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 C3orf36Q3SXR2 165 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 NANOGP8Q6NSW7 305 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 CGB2Q6NT52 195 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 CALHM3Q86XJ0 350 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 KBTBD8Q8NFY9 601 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 GPR32P1Q8NGA4 272 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 OR52N5Q8NH56 324 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 OR10A6Q8NH74 314 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 GTPBP3Q969Y2 492 aaKnown RBP10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 SLC25A36Q96CQ1 311 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 LRRC58Q96CX6 371 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 TRMT61AQ96FX7 289 aaKnown RBP10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 PERPQ96FX8 193 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 NANOGQ9H9S0 305 aa10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 SETD2Q9BYW2 2564 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-204ENST00000563273 ARPC4-TTLL3A0A0A6YYG9 625 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 M0R082 166 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ATP8B1O43520 1251 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 CHP2O43745 196 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 AKAP8O43823 692 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ROS1P08922 2347 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 INHBBP09529 407 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 CD247P20963 164 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 GRPRP30550 384 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 SELENOPP49908 381 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 KRTAP21-3Q3LHN1 58 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 C2CD3Q4AC94 2353 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ERICH5Q6P6B1 374 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 KLHL24Q6TFL4 600 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 DEPDC4Q8N2C3 294 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 FAM169BQ8N8A8 192 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 SMYD1Q8NB12 490 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 PCYOX1LQ8NBM8 494 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ZNF417Q8TAU3 575 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 Q96MF0 132 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ZNF587Q96SQ5 575 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 MCHR1Q99705 422 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 WFDC6Q9BQY6 131 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 TRAF4Q9BUZ4 470 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 SLC19A3Q9BZV2 496 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 GID8Q9NWU2 228 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 MRPL39Q9NYK5 338 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 CISD1Q9NZ45 108 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 LAMP3Q9UQV4 416 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 AP3M1Q9Y2T2 418 aa10.71□□□□□ -0.69
NSMCE1-204ENST00000563273 ACANP16112 2415 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 FREM1Q5H8C1 2179 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 VPS13CQ709C8 3753 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 TRAF3IP2O43734 574 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 SLC43A1O75387 559 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 KRT33AO76009 404 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 BGLAPP02818 100 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ZNF83P51522 516 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 CDH12P55289 794 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ATP5J2P56134 94 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 C1DQ13901 141 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 NPTX1Q15818 432 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 MMEL1Q495T6 779 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 AGAP6Q5VW22 663 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 REP15Q6BDI9 236 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ZNF544Q6NX49 715 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 NIPAL3Q6P499 406 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ANKRD16Q6P6B7 361 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 CCDC36Q8IYA8 594 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 PIK3C3Q8NEB9 887 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 OR6T1Q8NGN1 323 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 OR1K1Q8NGR3 316 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 NEUROG1Q92886 237 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 TAMM41Q96BW9 452 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 MPP4Q96JB8 637 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 LRR1Q96L50 414 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 DHRS9Q9BPW9 319 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ECSITQ9BQ95 431 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ZNF426Q9BUY5 554 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 PRR14Q9BWN1 585 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 ASPNQ9BXN1 380 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 POLR2J2Q9GZM3 115 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 POLR2J3Q9H1A7 115 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 FKRPQ9H9S5 495 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 BARX1Q9HBU1 254 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 CRNNQ9UBG3 495 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 NOX1Q9Y5S8 564 aa10.7□□□□□ -0.7
NSMCE1-204ENST00000563273 TRAPPC13A5PLN9 417 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms