RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DNAJA3Q96EY1 480 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 BOD1Q96IK1 185 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 FNDC11Q9BVV2 318 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 OR10A4Q9H209 315 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 GALNT8Q9NY28 637 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 ELOVL5Q9NYP7 299 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 MALT1Q9UDY8 824 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PROCRQ9UNN8 238 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 APCP25054 2843 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 TACC2O95359 2948 aa11.9□□□□□ -0.51
CDH1-204ENST00000562118 PKDREJQ9NTG1 2253 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 A1L4Q6 167 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 NPIPB4C9JG80 1138 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 LRRN3E7EW58 273 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 hCG_2039718K7EN88 272 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 KLF4O43474 513 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 OR7A10O76100 309 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 HPRP00739 348 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 PLGP00747 810 aaPredicted RBP11.89□□□□□ -0.51
CDH1-204ENST00000562118 FABP3P05413 133 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 H1F0P07305 194 aaKnown RBP11.89□□□□□ -0.51
CDH1-204ENST00000562118 UMPSP11172 480 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 COX5AP20674 150 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 UQCRC1P31930 480 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 IFNA8P32881 189 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 SIRPAP78324 504 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDH1-204ENST00000562118 TMEM201Q5SNT2 666 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 Q6ZT83 130 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 TMPRSS11FQ6ZWK6 438 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
CDH1-204ENST00000562118 PXKQ7Z7A4 578 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 GALNT5Q7Z7M9 940 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 ZDHHC21Q8IVQ6 265 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 ZNF610Q8N9Z0 462 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
CDH1-204ENST00000562118 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 ZNF347Q96SE7 839 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 OPN3Q9H1Y3 402 aaPredicted RBP11.89□□□□□ -0.51
CDH1-204ENST00000562118 TAS2R5Q9NYW4 299 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 RCE1Q9Y256 329 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 MED31Q9Y3C7 131 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
CDH1-204ENST00000562118 EEF1E1-BLOC1S5C9J1V9 151 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 EEF1E1O43324 174 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 PIP5K1CO60331 668 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 RAP2AP10114 183 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 PSMB1P20618 241 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 CD79BP40259 229 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 YAP1P46937 504 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 PUDPQ08623 228 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 GK3PQ14409 553 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 SEC23BQ15437 767 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 PODNL1Q6PEZ8 512 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 SLC25A36Q96CQ1 311 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 DUS3LQ96G46 650 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 ZNF385AQ96PM9 386 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 RBM24Q9BX46 236 aaKnown RBP11.88□□□□□ -0.51
CDH1-204ENST00000562118 ASPNQ9BXN1 380 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 TRIM15Q9C019 465 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 NANSQ9NR45 359 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 RHCGQ9UBD6 479 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
CDH1-204ENST00000562118 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 SH3PXD2BA1X283 911 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 EBAG9O00559 213 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 DIRAS1O95057 198 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 CH25HO95992 272 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 MAKP20794 623 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 PTNP21246 168 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 OMPP47874 163 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 SMIM11AP58511 58 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 FLOT2Q14254 428 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 P2RY6Q15077 328 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 PPP4R4Q6NUP7 873 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 LUZP2Q86TE4 346 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 NRMQ8IXM6 262 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 TMEM123Q8N131 208 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 LRRC75AQ8NAA5 344 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 OR4C15Q8NGM1 316 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 CANT1Q8WVQ1 401 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 BPIFA2Q96DR5 249 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 PARPBPQ9NWS1 579 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms