RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ZNF275Q9NSD4 429 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 CRNNQ9UBG3 495 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 MID2Q9UJV3 735 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 ARPC4-TTLL3A0A0A6YYG9 625 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 AGAP5A6NIR3 686 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 TMEM229AB2RXF0 380 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 B4DSR2 109 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 M0R3G1 203 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 RNASET2O00584 256 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NR2F1P10589 423 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NCF2P19878 526 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 EPHA1P21709 976 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 HTR3AP46098 478 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 CLK1P49759 484 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 MVKQ03426 396 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 EMX2Q04743 252 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 ABHD12BQ7Z5M8 362 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 SERPINA11Q86U17 422 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 CLIP4Q8N3C7 705 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF781Q8N8C0 355 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NUP37Q8NFH4 326 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 TCP10LQ8TDR4 215 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NEU4Q8WWR8 484 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 HPS1Q92902 700 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NEURL3Q96EH8 262 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 EMC6Q9BV81 110 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 GPR35Q9HC97 309 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 SLC6A13Q9NSD5 602 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 REV1Q9UBZ9 1251 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 PCDHB10Q9UN67 800 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 PPIAL4AQ9Y536 164 aa10.05□□□□□ -0.8
NSMCE1-202ENST00000561960 SERPINI2O75830 405 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 PDE5AO76074 875 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 MSMBP08118 114 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 GAAP10253 952 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 PNMTP11086 282 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 CBR1P16152 277 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ACAA2P42765 397 aaKnown RBP10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 MAGEB1P43366 347 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 UFM1P61960 85 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 MAPK11Q15759 364 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 AWAT1Q58HT5 328 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF311Q5JNZ3 666 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF621Q6ZSS3 439 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 GPR137CQ8N3F9 429 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 PMM1Q92871 262 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 KTI12Q96EK9 354 aaPredicted RBP10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ANKRD27Q96NW4 1050 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 TSPAN32Q96QS1 320 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 SF3B5Q9BWJ5 86 aaKnown RBP10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF442Q9H7R0 627 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 CMAHPQ9Y471 501 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
NSMCE1-202ENST00000561960 PRSS51A0A1B0GVH4 220 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 TMEM89A2RUT3 159 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 CCDC154A6NI56 674 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 M0R233 179 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 AGR2O95994 175 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 BCHEP06276 602 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 CCL2P13500 99 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 HLA-DOBP13765 273 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 ETFAP13804 333 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 B4GALT1P15291 398 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 RPS4Y1P22090 263 aaKnown RBP10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 IL12AP29459 219 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 DEFA6Q01524 100 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 GLO1Q04760 184 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 CASP8Q14790 479 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 GTDC1Q4AE62 458 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 NATD1Q8N6N6 113 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 OR8J2Q8NGG1 315 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 OR52P1PQ8NH57 321 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 TRNT1Q96Q11 434 aaKnown RBP10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 PTDSS2Q9BVG9 487 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 NUF2Q9BZD4 464 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 C20orf27Q9GZN8 174 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 OBP2BQ9NPH6 170 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 USP22Q9UPT9 525 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF443Q9Y2A4 671 aaPredicted RBP10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 CHST2Q9Y4C5 530 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 SPEF1Q9Y4P9 236 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 CACNG2Q9Y698 323 aa10.03□□□□□ -0.8
NSMCE1-202ENST00000561960 A0A1W2PPW3 197 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 CDHR4A6H8M9 788 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 A8MVM7 634 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 M0R082 166 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 SYNGR3O43761 229 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF500O60304 480 aaPredicted RBP10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 SLC43A1O75387 559 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 CLPTM1O96005 669 aa10.02□□□□□ -0.81
NSMCE1-202ENST00000561960 HPRP00739 348 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms