RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 AMBNQ9NP70 447 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 NRN1Q9NPD7 142 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 MRPL40Q9NQ50 206 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 KLRF1Q9NZS2 232 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 PURGQ9UJV8 347 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 VANGL2Q9ULK5 521 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 SLC17A4Q9Y2C5 497 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 KLF2Q9Y5W3 355 aaPredicted RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 U3KQV3 271 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 BAZ2BQ9UIF8 2168 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 FRYQ5TBA9 3013 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 MTCL1Q9Y4B5 1905 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 KIF26AQ9ULI4 1882 aaPredicted RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 VWA8A3KMH1 1905 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 A0A1B0GUH1 482 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 FOXI3A8MTJ6 420 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 SGK494L7N484 410 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 SH3BGRLO75368 114 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 STK17BO94768 372 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 NDUFA7O95182 113 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ADCY5O95622 1261 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CD160O95971 181 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 UGT2B4P06133 528 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 KRT7P08729 469 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 PTPN6P29350 595 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 HSPA9P38646 679 aaKnown RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 ETV5P41161 510 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 MFAP2P55001 183 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 AP1S1P61966 158 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 RPS15P62841 145 aaKnown RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 HSF2Q03933 536 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ART3Q13508 389 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CHRNA6Q15825 494 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 TPD52L1Q16890 204 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 TMEM44Q2T9K0 475 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ZNF506Q5JVG8 444 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ACER2Q5QJU3 275 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 BEND6Q5SZJ8 279 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 TPRG1LQ5T0D9 272 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 C9orf66Q5T8R8 295 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 PPP1R2P3Q6NXS1 205 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 IGFL3Q6UXB1 125 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CEACAM19Q7Z692 300 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 VASH2Q86V25 355 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 SLC47A2Q86VL8 602 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 AMZ2Q86W34 360 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ZNF677Q86XU0 584 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CCDC71Q8IV32 467 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 PSTKQ8IV42 348 aaKnown RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 UMODL1-AS1Q8N2C9 162 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 Q8N377 158 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 Q8N9G6 341 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 OR52K2Q8NGK3 314 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 KLK6Q92876 244 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ART4Q93070 314 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 LHX4Q969G2 390 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 NTAN1Q96AB6 310 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 ECHDC3Q96DC8 303 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 FAM173AQ9BQD7 235 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CARD6Q9BX69 1037 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 TCEAL2Q9H3H9 227 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 IL1RL2Q9HB29 575 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 OR12D3Q9UGF7 316 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 CHMP2BQ9UQN3 213 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 TP53TG5Q9Y2B4 290 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 DMXL2Q8TDJ6 3036 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 NUP210Q8TEM1 1887 aaPredicted RBP2.98□□□□□ -1.93
HERC1-215ENST00000561436 DOCK5Q9H7D0 1870 aa2.98□□□□□ -1.93
HERC1-215ENST00000561436 SPTBN2O15020 2390 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 TICRRQ7Z2Z1 1910 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 IGF2RP11717 2491 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ACOD1A6NK06 481 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 C11orf98E9PRG8 122 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 VPS26AO75436 327 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ANP32DO95626 131 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ECDO95905 644 aaPredicted RBP2.97□□□□□ -1.93
HERC1-215ENST00000561436 CCDC159P0C7I6 412 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ZNF30P17039 623 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 PTPN4P29074 926 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 SAA4P35542 130 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CD86P42081 329 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 POLR2FP61218 127 aaKnown RBP2.97□□□□□ -1.93
HERC1-215ENST00000561436 RPL26P61254 145 aaKnown RBP2.97□□□□□ -1.93
HERC1-215ENST00000561436 RHOAP61586 193 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 PPIAP62937 165 aaKnown RBP2.97□□□□□ -1.93
HERC1-215ENST00000561436 BCL2L1Q07817 233 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CD300CQ08708 224 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 PDZK1IP1Q13113 114 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CRMP1Q14194 572 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ZNF235Q14590 738 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CEBPEQ15744 281 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 HIGD2BQ4VC39 106 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 FAM173BQ6P4H8 233 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 LRRC8BQ6P9F7 803 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 AFTPHQ6ULP2 937 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ATRAIDQ6UW56 229 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 WASH2PQ6VEQ5 465 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms