RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SEMA3DO95025 777 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CCNDBP1O95273 360 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 H6PDO95479 791 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 C1orf105O95561 183 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 KRT75O95678 551 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CLPTM1O96005 669 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 HPRP00739 348 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 PDYNP01213 254 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ABCB1P08183 1280 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 F7P08709 466 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 RBMY1DP0C7P1 496 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 FAM58BPP0C7Q3 252 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ZCCHC18P0CG32 403 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 C1GALT1C1LP0DN25 315 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 IGHV4-31P0DP07 118 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TFPIP10646 304 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 BCKDHAP12694 445 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CDH1P12830 882 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ICAM2P13598 275 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 COX7A2P14406 83 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ZNF26P17031 533 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 TCN1P20061 433 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 CALRP27797 417 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 POU1F1P28069 291 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CDKN1AP38936 164 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 GSK3BP49841 420 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RPL38P63173 70 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 CSNK2BP67870 215 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ABATP80404 500 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 MRPS22P82650 360 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 VLDLRP98155 873 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TGM3Q08188 693 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CHIT1Q13231 466 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 IL18R1Q13478 541 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 NAE1Q13564 534 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 KIAA0040Q15053 153 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RBBP5Q15291 538 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 ATP6AP1Q15904 470 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 PHKG1Q16816 387 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 MEP1AQ16819 746 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 LRRC36Q1X8D7 754 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TMEM35AQ53FP2 167 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SGO1Q5FBB7 561 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 LRIF1Q5T3J3 769 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CPTPQ5TA50 214 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TTC23Q5W5X9 447 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 GLYATQ6IB77 296 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 FAM166AQ6J272 317 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 KRT80Q6KB66 452 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 C11orf87Q6NUJ2 197 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 NOXRED1Q6NXP6 359 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TMEM81Q6P7N7 255 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TMEM220Q6QAJ8 160 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 FIGLAQ6QHK4 219 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 DLEU7Q6UYE1 221 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 Q6ZTK2 550 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 IKBIPQ70UQ0 350 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 DET1Q7L5Y6 550 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 PAGE2Q7Z2X7 111 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 GPR180Q86V85 440 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TRAPPC5Q8IUR0 188 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CFAP206Q8IYR0 622 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RNF148Q8N7C7 305 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TTLQ8NG68 377 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 OR8J2Q8NGG1 315 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 OR9I1Q8NGQ6 314 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 HM13Q8TCT9 377 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CREB3L4Q8TEY5 395 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 FAM216AQ8WUB2 273 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ZFAND2BQ8WV99 257 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 GTF2H4Q92759 462 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 MRPL24Q96A35 216 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 DGCR14Q96DF8 476 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 NRBF2Q96F24 287 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 AURKBQ96GD4 344 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 FCRL1Q96LA6 429 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 WFIKKN1Q96NZ8 548 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 KCNA7Q96RP8 456 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TMEM79Q9BSE2 394 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CHID1Q9BWS9 393 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ANGPTL4Q9BY76 406 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SLC26A1Q9H2B4 701 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 COQ10BQ9H8M1 238 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 COPS7BQ9H9Q2 264 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 CLK4Q9HAZ1 481 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 IL1RL2Q9HB29 575 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 VCX3AQ9NNX9 186 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CCDC177Q9NQR7 707 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 IMP3Q9NV31 184 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 CMTM6Q9NX76 183 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 THUMPD1Q9NXG2 353 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 KLHL28Q9NXS3 571 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SPATA7Q9P0W8 599 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 HCN3Q9P1Z3 774 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 DNAJB9Q9UBS3 223 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SLC25A10Q9UBX3 287 aaPredicted RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 ENOPH1Q9UHY7 261 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 BTNL2Q9UIR0 455 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms