RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 POU4F2Q12837 409 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 CCDC157Q569K6 752 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 LY6G5CQ5SRR4 150 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 ZNF614Q8N883 585 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 PCDHB10Q9UN67 800 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 ZNF337Q9Y3M9 751 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 OR6C68A6NDL8 312 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 LATO43561 262 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 SLC25A12O75746 678 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 GLSO94925 669 aaPredicted RBP15.12■□□□□ 0.01
TPM1-228ENST00000560975 SOD2P04179 222 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 SYS1Q8N2H4 156 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 SLC2A12Q8TD20 617 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 HSPA12BQ96MM6 686 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 ABT1Q9ULW3 272 aaKnown RBP15.12■□□□□ 0.01
TPM1-228ENST00000560975 ZNF281Q9Y2X9 895 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 LYPD3O95274 346 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 H2AFB1P0C5Y9 115 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 SPP1P10451 314 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ADRA2CP18825 462 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 MAPK3P27361 379 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 BDKRB2P30411 391 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 PRKCZQ05513 592 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 LTBQ06643 244 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 KCNAB1Q14722 419 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 TAF13Q15543 124 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ODF4Q2M2E3 257 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 GXYLT1Q4G148 440 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 RPL13AP3Q6NVV1 102 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 STAC2Q6ZMT1 411 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 TMPRSS11FQ6ZWK6 438 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 KRT77Q7Z794 578 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 RNF180Q86T96 592 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 TCEAL8Q8IYN2 117 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 DND1Q8IYX4 353 aaKnown RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 RNF113BQ8IZP6 322 aaKnown RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 NANPQ8TBE9 248 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ZNF514Q96K75 400 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 LINC00615Q96LM1 132 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 SDF2Q99470 211 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 NKX3-1Q99801 234 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 VRK1Q99986 396 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 MENTQ9BUN1 341 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 KCNK15Q9H427 330 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 POFUT1Q9H488 388 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 APMAPQ9HDC9 416 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 PRSS16Q9NQE7 514 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ADAM18Q9Y3Q7 739 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 IER3IP1Q9Y5U9 82 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 DUXAA6NLW8 204 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 CTNSO60931 367 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 CD3DP04234 171 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ERGP11308 486 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ADCYAP1P18509 176 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 AK4P27144 223 aaPredicted RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 CAPZA2P47755 286 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 RAB33AQ14088 237 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 SWI5Q1ZZU3 235 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ZNF528Q3MIS6 628 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 SEC22AQ96IW7 307 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ZNF681Q96N22 645 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 CAPN10Q9HC96 672 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 SLC22A11Q9NSA0 550 aa15.11■□□□□ 0.01
TPM1-228ENST00000560975 ZNF346Q9UL40 294 aaKnown RBP15.11■□□□□ 0.01
TPM1-228ENST00000560975 TMEM218A2RU14 115 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 H7C417 338 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 CCSO14618 274 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 HOXA2O43364 376 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 AKR7A3O95154 331 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 EFEMP2O95967 443 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ARFIP1P53367 373 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PPIAP62937 165 aaKnown RBP15.1■□□□□ 0.01
TPM1-228ENST00000560975 S100A12P80511 92 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ID2Q02363 134 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 EIPR1Q53HC9 387 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 FAM209BQ5JX69 171 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 FIGNL1Q6PIW4 674 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 SVBPQ8N300 66 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 IRF7Q92985 503 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 C10orf90Q96M02 699 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PTCHD1Q96NR3 888 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 GAL3ST1Q99999 423 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PCBD2Q9H0N5 130 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ADAP2Q9NPF8 381 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 MTFP1Q9UDX5 166 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 KCNE5Q9UJ90 142 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 FBXO4Q9UKT5 387 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PRR32B1ATL7 298 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ADAM11O75078 769 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 LIPCP11150 499 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 EFNB2P52799 333 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 POLR2GP62487 172 aaKnown RBP eCLIP15.1■□□□□ 0.01
TPM1-228ENST00000560975 BTN3A2P78410 334 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ARHGAP19Q14CB8 494 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 LY6G6FQ5SQ64 297 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 RAB12Q6IQ22 244 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 JMJD6Q6NYC1 403 aaPredicted RBP15.1■□□□□ 0.01
TPM1-228ENST00000560975 OR2L13Q8N349 312 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms