RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LAT2Q9GZY6 243 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ACSS3Q9H6R3 686 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 SAP30LQ9HAJ7 183 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ROPN1Q9HAT0 212 aaPredicted RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 MMP26Q9NRE1 261 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 CTPS2Q9NRF8 586 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 DUSP22Q9NRW4 184 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 OR5V1Q9UGF6 321 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 TRIM49D1C9J1S8 452 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 TRAF3IP2O43734 574 aaPredicted RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 XPNPEP2O43895 674 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 OR4F21O95013 312 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 KLHL2O95198 593 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 MPIG6BO95866 241 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 MT-ND5P03915 603 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 SNRPAP09012 282 aaKnown RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 UBTFL6P0CB48 400 aaPredicted RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 FAM157BP0CG42 384 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 CHN1P15882 459 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 ZNF12P17014 697 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 TSPAN8P19075 237 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 CDH13P55290 713 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 PROK1P58294 105 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 H3F3AP84243 136 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 ROR2Q01974 943 aaKnown RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 COL10A1Q03692 680 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 LASP1Q14847 261 aaKnown RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 RASA2Q15283 850 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 MSMPQ1L6U9 139 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 KLHL22Q53GT1 634 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 DCST2Q5T1A1 773 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 MROH9Q5TGP6 573 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 FAM71E1Q6IPT2 247 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 NIPAL3Q6P499 406 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 ZNF620Q6ZNG0 422 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 HDXQ7Z353 690 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 GRINAQ7Z429 371 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 LRP11Q86VZ4 500 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 TMEM86BQ8N661 226 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 DCAKDQ8WVC6 231 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 DIRC2Q96SL1 478 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 PAFAH2Q99487 392 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 OCSTAMPQ9BR26 566 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 CHIAQ9BZP6 476 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 NMUR2Q9GZQ4 415 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 VPS11Q9H270 941 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 PIGUQ9H490 435 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 PIF1Q9H611 641 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 NOX4Q9NPH5 578 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 SLC6A13Q9NSD5 602 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 TAAR3PQ9P1P4 343 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 MYEF2Q9P2K5 600 aaKnown RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 PSMC3IPQ9P2W1 217 aaPredicted RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 PCDHGB4Q9UN71 923 aa8.09□□□□□ -1.11
HERC1-210ENST00000560897 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.09□□□□□ -1.11
HERC1-210ENST00000560897 SLC22A23A1A5C7 686 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 RGS16O15492 202 aaPredicted RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 CSTAP01040 98 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 C2P06681 752 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 RPS17P08708 135 aaKnown RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 KRT16P08779 473 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 RBP1P09455 135 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 SELENOPP49908 381 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 CD69Q07108 199 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 SKP2Q13309 424 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 IMPG1Q17R60 797 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 DEFB112Q30KQ8 113 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 KRT71Q3SY84 523 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 CEP85LQ5SZL2 805 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 PDZK1Q5T2W1 519 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 TMEM225Q6GV28 225 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 RGS7BPQ6MZT1 257 aaPredicted RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 RPS27LQ71UM5 84 aaKnown RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 CMIPQ8IY22 773 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 SPICQ8N5J4 248 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 METTL6Q8TCB7 284 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 ADAMTS15Q8TE58 950 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 CCL17Q92583 94 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 PMM1Q92871 262 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 CCDC106Q9BWC9 280 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 SERHL2Q9H4I8 314 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 ZCCHC3Q9NUD5 404 aaKnown RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 SLCO1C1Q9NYB5 712 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 FAF1Q9UNN5 650 aaPredicted RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 POLR3HQ9Y535 204 aaPredicted RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 SOX21Q9Y651 276 aaPredicted RBP8.08□□□□□ -1.12
HERC1-210ENST00000560897 POMT1Q9Y6A1 747 aa8.08□□□□□ -1.12
HERC1-210ENST00000560897 DOCK11Q5JSL3 2073 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 DSPPQ9NZW4 1301 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 RYR2Q92736 4967 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 PPP6CO00743 305 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms