RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 ANKRD16Q6P6B7 361 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 CCDC36Q8IYA8 594 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 DYDC1Q8WWB3 177 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 PTDSS2Q9BVG9 487 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 TMEM27Q9HBJ8 222 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 SLC25A37Q9NYZ2 338 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 SLC13A4Q9UKG4 626 aa18.04■□□□□ 0.48
ETFA-213ENST00000560309 VSTM5A8MXK1 200 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 CRYAAP02489 173 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 CDH2P19022 906 aaPredicted RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 RPS5P46782 204 aaKnown RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 SELENOPP49908 381 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 EFNA4P52798 201 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 AQP5P55064 265 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 SPOCK1Q08629 439 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 SQLEQ14534 574 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 B3GLCTQ6Y288 498 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 H1FNTQ75WM6 255 aaPredicted RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 PRIMA1Q86XR5 153 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 ADPRHL1Q8NDY3 354 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 BCL2L2Q92843 193 aaPredicted RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 SLC47A1Q96FL8 570 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 SLC38A2Q96QD8 506 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 EPYCQ99645 322 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 KATNB1Q9BVA0 655 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 TESQ9UGI8 421 aaKnown RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 CORINQ9Y5Q5 1042 aa18.03■□□□□ 0.48
ETFA-213ENST00000560309 CHD3Q12873 2000 aaKnown RBP18.03■□□□□ 0.48
ETFA-213ENST00000560309 TRAV36DV7A0A075B6V5 113 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 NR5A2O00482 541 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 SLC43A1O75387 559 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 NCALDP61601 193 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 SLC25A3Q00325 362 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 LOXL1Q08397 574 aaPredicted RBP18.02■□□□□ 0.48
ETFA-213ENST00000560309 C1DQ13901 141 aaKnown RBP18.02■□□□□ 0.48
ETFA-213ENST00000560309 HIKESHIQ53FT3 197 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 ALG10BQ5I7T1 473 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 MSRB3Q8IXL7 192 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 NFKBIDQ8NI38 313 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 PROX1Q92786 737 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 KTI12Q96EK9 354 aaPredicted RBP18.02■□□□□ 0.48
ETFA-213ENST00000560309 EBF4Q9BQW3 602 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 SLCO1B3Q9NPD5 702 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 SLC52A3Q9NQ40 469 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 VAPAQ9P0L0 249 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 SLAMF8Q9P0V8 285 aa18.02■□□□□ 0.48
ETFA-213ENST00000560309 CRNNQ9UBG3 495 aaPredicted RBP18.02■□□□□ 0.48
ETFA-213ENST00000560309 CR1P17927 2039 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 TRBV5-3A0A0A0MS03 114 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 A0A1B0GWA3 101 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 PDE5AO76074 875 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 ZNF432O94892 652 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 LGI1O95970 557 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 F12P00748 615 aaPredicted RBP18.01■□□□□ 0.47
ETFA-213ENST00000560309 PTNP21246 168 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 CLDN17P56750 224 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 HOXC5Q00444 222 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 SCARB2Q14108 478 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 AGKQ53H12 422 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 PAGE3Q5JUK9 113 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 SWT1Q5T5J6 900 aaKnown RBP18.01■□□□□ 0.47
ETFA-213ENST00000560309 MAPK1IP1LQ8NDC0 245 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 HIPK4Q8NE63 616 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 PIK3C3Q8NEB9 887 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 IL17RDQ8NFM7 739 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 OR4F15Q8NGB8 312 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 FAM168AQ92567 244 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 TNFRSF13CQ96RJ3 184 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 MOKQ9UQ07 419 aa18.01■□□□□ 0.47
ETFA-213ENST00000560309 A0A087WUJ7 227 aa18■□□□□ 0.47
ETFA-213ENST00000560309 ATP6V1G2-DDX39BF2Z307 99 aa18■□□□□ 0.47
ETFA-213ENST00000560309 UPK3AO75631 287 aa18■□□□□ 0.47
ETFA-213ENST00000560309 ROR2Q01974 943 aaKnown RBP18■□□□□ 0.47
ETFA-213ENST00000560309 RBBP4Q09028 425 aa18■□□□□ 0.47
ETFA-213ENST00000560309 SWI5Q1ZZU3 235 aa18■□□□□ 0.47
ETFA-213ENST00000560309 RANBP3LQ86VV4 465 aaPredicted RBP18■□□□□ 0.47
ETFA-213ENST00000560309 GPR137CQ8N3F9 429 aa18■□□□□ 0.47
ETFA-213ENST00000560309 SCAIQ8N9R8 606 aa18■□□□□ 0.47
ETFA-213ENST00000560309 TSPEARQ8WU66 669 aa18■□□□□ 0.47
ETFA-213ENST00000560309 TAAR8Q969N4 342 aa18■□□□□ 0.47
ETFA-213ENST00000560309 ALKBH3Q96Q83 286 aaPredicted RBP18■□□□□ 0.47
ETFA-213ENST00000560309 SIKE1Q9BRV8 207 aa18■□□□□ 0.47
ETFA-213ENST00000560309 MYOZ1Q9NP98 299 aaPredicted RBP18■□□□□ 0.47
ETFA-213ENST00000560309 INTS9Q9NV88 658 aaKnown RBP18■□□□□ 0.47
ETFA-213ENST00000560309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18■□□□□ 0.47
ETFA-213ENST00000560309 LEF1Q9UJU2 399 aaPredicted RBP18■□□□□ 0.47
ETFA-213ENST00000560309 TRIM33Q9UPN9 1127 aa18■□□□□ 0.47
ETFA-213ENST00000560309 ANGPT4Q9Y264 503 aa18■□□□□ 0.47
ETFA-213ENST00000560309 FKBP7Q9Y680 259 aa18■□□□□ 0.47
ETFA-213ENST00000560309 SONP18583 2426 aaKnown RBP17.99■□□□□ 0.47
ETFA-213ENST00000560309 IGHV4-30-2A0A087WSY4 118 aa17.99■□□□□ 0.47
ETFA-213ENST00000560309 IGHV1-18A0A0C4DH31 117 aa17.99■□□□□ 0.47
ETFA-213ENST00000560309 HMGB1P1B2RPK0 211 aaPredicted RBP17.99■□□□□ 0.47
ETFA-213ENST00000560309 B9A039 149 aa17.99■□□□□ 0.47
ETFA-213ENST00000560309 IFNA2P01563 188 aa17.99■□□□□ 0.47
ETFA-213ENST00000560309 VIMP08670 466 aaKnown RBP17.99■□□□□ 0.47
ETFA-213ENST00000560309 SERPINF1P36955 418 aa17.99■□□□□ 0.47
ETFA-213ENST00000560309 RGS8P57771 180 aaPredicted RBP17.99■□□□□ 0.47
ETFA-213ENST00000560309 SNRPD2P62316 118 aaKnown RBP17.99■□□□□ 0.47
ETFA-213ENST00000560309 RUNDC3AQ59EK9 446 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms