RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 ADAM5Q6NVV9 412 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 NIPAL3Q6P499 406 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 WDFY1Q8IWB7 410 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 WDR31Q8NA23 367 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 PCYOX1LQ8NBM8 494 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 KBTBD8Q8NFY9 601 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 MUCL1Q96DR8 90 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 SH3GL1Q99961 368 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 AMBRA1Q9C0C7 1298 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 ESRP2Q9H6T0 727 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 NGBQ9NPG2 151 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 CMTM6Q9NX76 183 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 SELENONQ9NZV5 590 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC25A15Q9Y619 301 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 MS4A18H0YCH9 400 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 AIM2O14862 343 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC22A2O15244 555 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 OR2T1O43869 369 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 FMO6PO60774 539 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SMPD2O60906 423 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 UPK3AO75631 287 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 HLA-DOBP13765 273 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 GTF2E2P29084 291 aaKnown RBP10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 NKX6-1P78426 367 aaPredicted RBP10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SPOCK1Q08629 439 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 MS4A18Q3C1V0 323 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 HIKESHIQ53FT3 197 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF613Q6PF04 617 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 C5orf46Q6UWT4 87 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 H1FNTQ75WM6 255 aaPredicted RBP10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 P2RY8Q86VZ1 359 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF611Q8N823 705 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 RP9Q8TA86 221 aaKnown RBP10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC26A7Q8TE54 656 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 ADAMTS16Q8TE57 1224 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 PIGTQ969N2 578 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 PERPQ96FX8 193 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 OXGR1Q96P68 337 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 ALKBH3Q96Q83 286 aaPredicted RBP10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 PIP5K1AQ99755 562 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 TMEM43Q9BTV4 400 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 FAM107BQ9H098 131 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 EVA1AQ9H8M9 152 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 GID8Q9NWU2 228 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 SH3GLB1Q9Y371 365 aa10.22□□□□□ -0.77
RABGGTA-216ENST00000560243 TRAPPC13A5PLN9 417 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 FAM220BPB1ANY3 271 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SHISA9B4DS77 424 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 ABCD4O14678 606 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 TRAF3IP2O43734 574 aaPredicted RBP10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 CHP2O43745 196 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 CCDC22O60826 627 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF432O94892 652 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SOD3P08294 240 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 CD99P14209 185 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF43P17038 809 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 DRD4P21917 467 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 MPGP29372 298 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 OR1E2P47887 323 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 IL1RL1Q01638 556 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 C1DQ13901 141 aaKnown RBP10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 VEZF1Q14119 521 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 CYBRD1Q53TN4 286 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SWT1Q5T5J6 900 aaKnown RBP10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 OR7E24Q6IFN5 339 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 ERICH5Q6P6B1 374 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 NHLRC1Q6VVB1 395 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 CARM1Q86X55 608 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC15A3Q8IY34 581 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 C10orf53Q8N6V4 93 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 POMGNT2Q8NAT1 580 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 OR2T12Q8NG77 320 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC41A3Q96GZ6 507 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 PRSS27Q9BQR3 290 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 PCDHAC1Q9H158 963 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC17A5Q9NRA2 495 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC7A7Q9UM01 511 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 B3GALT5Q9Y2C3 310 aa10.21□□□□□ -0.77
RABGGTA-216ENST00000560243 LOC102725191A0A1B0GVB3 256 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 M0R1B8 84 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 KPNA4O00629 521 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 NME4O00746 187 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 KRT33AO76009 404 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 DANCRP0C864 163 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 CD40P25942 277 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 LSP1P33241 339 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 KDELR2P33947 212 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 ROR2Q01974 943 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 LIPEQ05469 1076 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 PMS2P3Q13401 168 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF672Q499Z4 452 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 LRRC23Q53EV4 343 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms