RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 UMAD1C9J7I0 102 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 LEFTY2O00292 366 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ADRB1P08588 477 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF888P0CJ79 500 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 NPY1RP25929 384 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 GDF1P27539 372 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ELLP55199 621 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC25A11Q02978 314 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 FIBINQ8TAL6 211 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 NETO1Q8TDF5 533 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 TSLPQ969D9 159 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 UCK1Q9HA47 277 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ELOVL3Q9HB03 270 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 APOBEC3BQ9UH17 382 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR5K3A6NET4 321 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 CCKARP32238 428 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ETV3P41162 512 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 BPIFB3P59826 476 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 WBP2NLQ6ICG8 309 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 OPN5Q6U736 354 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 BRI3BPQ8WY22 251 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCNG2Q9UJ96 466 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 SDHDO14521 159 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 PMS2P2O95744 297 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 SCGB1A1P11684 91 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF691Q5VV52 312 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 FIGLAQ6QHK4 219 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 FA2HQ7L5A8 372 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 SELENOIQ9C0D9 397 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 DDX31Q9H8H2 851 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 AK3Q9UIJ7 227 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 LEFTY1O75610 366 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ORM1P02763 201 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 HTR4Q13639 388 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNF150Q9ULK6 438 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 BOKQ9UMX3 212 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 TAAR5O14804 337 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 IL1R2P27930 398 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 Q6ZTK2 550 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 GPR174Q9BXC1 333 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 STYXL1Q9Y6J8 313 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 C17orf105B2RV13 164 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 EDN3P14138 238 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RGNQ15493 299 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 IQCJQ1A5X6 159 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 ADAM5Q6NVV9 412 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 NLRC3Q7RTR2 1065 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 LMNTD1Q8N9Z9 388 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RAB27BO00194 218 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 HHEXQ03014 270 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMUB2Q71RG4 321 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RABEPKQ7Z6M1 372 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 SCCPDHQ8NBX0 429 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR10J5Q8NHC4 309 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 C1orf74Q96LT6 269 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 GPR62Q9BZJ7 368 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 CHD4Q14839 1912 aa12.93□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNASET2O00584 256 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 NXPH2O95156 264 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 P2RX3P56373 397 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 SYT6Q5T7P8 510 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 CLEC9AQ6UXN8 241 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR13C8Q8NGS7 320 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZFP90Q8TF47 636 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 SEC22AQ96IW7 307 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 NSUN5Q96P11 429 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 VDAC3Q9Y277 283 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 STC2O76061 302 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 RPL22L1Q6P5R6 122 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR13D1Q8NGV5 346 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 GGHQ92820 318 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 UBQLN4Q9NRR5 601 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 VAPAQ9P0L0 249 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF443Q9Y2A4 671 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 TNFRSF1BP20333 461 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 HCCSP53701 268 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 DOC2AQ14183 400 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms