RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 REEP3Q6NUK4 255 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 ANKRD16Q6P6B7 361 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 PODNL1Q6PEZ8 512 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 NET1Q7Z628 596 aaPredicted RBP10.71□□□□□ -0.69
SPG11-219ENST00000559822 HIPK1Q86Z02 1210 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 EPHX4Q8IUS5 362 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 GPR137CQ8N3F9 429 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 ZNF525Q8N782 197 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 LSMEM1Q8N8F7 131 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 MAL2Q969L2 176 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 SPDL1Q96EA4 605 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 FBXO17Q96EF6 278 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 OXGR1Q96P68 337 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 TNFRSF13CQ96RJ3 184 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 CCDC28BQ9BUN5 200 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 EVA1AQ9H8M9 152 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 SLC13A4Q9UKG4 626 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 ADAM21Q9UKJ8 722 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 EVPLLA8MZ36 301 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 RPL36A-HNRNPH2H7BZ11 118 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 FZD7O75084 574 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 F12P00748 615 aaPredicted RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 HOXB9P17482 250 aaPredicted RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 SLC6A2P23975 617 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 CLDN17P56750 224 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 VLDLRP98155 873 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 CDK6Q00534 326 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 ROR2Q01974 943 aaKnown RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 EGR4Q05215 589 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 CHRFAM7AQ494W8 412 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 ALG10BQ5I7T1 473 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 C6orf52Q5T4I8 152 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 FAM91A1Q658Y4 838 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 DHRS4L2Q6PKH6 230 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 CXXC5Q7LFL8 322 aaKnown RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 CCDC36Q8IYA8 594 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 FAM169BQ8N8A8 192 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 PIK3C3Q8NEB9 887 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 OR4F15Q8NGB8 312 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 SPATA3Q8NHX4 192 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 NFKBIDQ8NI38 313 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 BCL2L2Q92843 193 aaPredicted RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 SLC47A1Q96FL8 570 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 EPYCQ99645 322 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 MDFIQ99750 246 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 PTDSS2Q9BVG9 487 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 TMEM38AQ9H6F2 299 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 MYOZ1Q9NP98 299 aaPredicted RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 CRNNQ9UBG3 495 aaPredicted RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 TESQ9UGI8 421 aaKnown RBP10.7□□□□□ -0.7
SPG11-219ENST00000559822 GMEB1Q9Y692 573 aa10.7□□□□□ -0.7
SPG11-219ENST00000559822 TRAV36DV7A0A075B6V5 113 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 A0A096LNT2 108 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 LOC102725191A0A1B0GVB3 256 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 A0A1B0GWA3 101 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 B9A039 149 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 M0R082 166 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 NDUFS8O00217 210 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 UPK3AO75631 287 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 SERPINB7O75635 380 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 ZNF432O94892 652 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 SERPINF1P36955 418 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 PDLIM4P50479 330 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 ATP4BP51164 291 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 HOXC5Q00444 222 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 IL1RL1Q01638 556 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 NAAAQ02083 359 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 SWI5Q1ZZU3 235 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 ULK3Q6PHR2 472 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 H1FNTQ75WM6 255 aaPredicted RBP10.69□□□□□ -0.7
SPG11-219ENST00000559822 ADPRHL1Q8NDY3 354 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 OR6S1Q8NH40 331 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 ZNF417Q8TAU3 575 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 KTI12Q96EK9 354 aaPredicted RBP10.69□□□□□ -0.7
SPG11-219ENST00000559822 ZNF587Q96SQ5 575 aaPredicted RBP10.69□□□□□ -0.7
SPG11-219ENST00000559822 RABEP2Q9H5N1 569 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 TMEM27Q9HBJ8 222 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 CA10Q9NS85 328 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 SLC25A37Q9NYZ2 338 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 CCDC167Q9P0B6 97 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 CDC42EP3Q9UKI2 254 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 CORINQ9Y5Q5 1042 aa10.69□□□□□ -0.7
SPG11-219ENST00000559822 ATRQ13535 2644 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 ALPK2Q86TB3 2170 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 A0A096LPE4 126 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 A0A1W2PPZ6 126 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 GPRIN2O60269 458 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 IGKV3-15P01624 115 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 ERCC1P07992 297 aaPredicted RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 CECR9P0C854 216 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 NQO1P15559 274 aaKnown RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 USF1P22415 310 aaPredicted RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 GRPRP30550 384 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms