RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TPOP07202 933 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 ZNF20P17024 532 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 APEX1P27695 318 aaKnown RBP9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 ACVR1BP36896 505 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 CAV3P56539 151 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 UBE2NP61088 152 aaKnown RBP9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 FOXK1P85037 733 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 RBPJQ06330 500 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 KIAA0040Q15053 153 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 SWI5Q1ZZU3 235 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 RAB12Q6IQ22 244 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 ARSKQ6UWY0 536 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 VASH2Q86V25 355 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 MISPQ8IVT2 679 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 OR1N1Q8NGS0 311 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 WDR34Q96EX3 536 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 PITX2Q99697 317 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 MENTQ9BUN1 341 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 ACTR6Q9GZN1 396 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 A4GALTQ9NPC4 353 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 PLSCR3Q9NRY6 295 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 FKBP14Q9NWM8 211 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 MUC6Q6W4X9 2439 aa9.8□□□□□ -0.84
CARMIL3-202ENST00000559694 SMLR1H3BR10 107 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 KCNK2O95069 426 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 MT-ND5P03915 603 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RASGEF1BQ0VAM2 473 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PXDC1Q5TGL8 231 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 SAXO2Q658L1 398 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PEG10Q86TG7 708 aaKnown RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 CPOQ8IVL8 374 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 ACOT12Q8WYK0 555 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RADILQ96JH8 1075 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PPA2Q9H2U2 334 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 OR51J1Q9H342 316 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 DISC1C4P0D8 188 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 ITGA10O75578 1167 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 F13BP05160 661 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 H2BFMP0C1H6 154 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RFC3P40938 356 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PRKXP51817 358 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 SELENOVP59797 346 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 ADAM8P78325 824 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 ATXN7L3Q14CW9 347 aaPredicted RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC6A19Q695T7 634 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 USP51Q70EK9 711 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 D2HGDHQ8N465 521 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 BCORP1Q8N888 145 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 THAP4Q8WY91 577 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 ELMOD3Q96FG2 381 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 TSNAXQ99598 290 aaKnown RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RHNO1Q9BSD3 238 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 TSPAN10Q9H1Z9 355 aaPredicted RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 IKZF5Q9H5V7 419 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 LHX9Q9NQ69 397 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RBM7Q9Y580 266 aaKnown RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 CDH10Q9Y6N8 788 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 LNP1A1A4G5 178 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 SUSD5O60279 629 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PRAMEF4O60810 478 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 IL1AP01583 271 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RNF4P78317 190 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 NKG7Q16617 165 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 PRAMEF9Q5VWM5 478 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 KDM4DQ6B0I6 523 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 YRDCQ86U90 279 aaKnown RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 NAXEQ8NCW5 288 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 OR5J2Q8NH18 312 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 NUDT9Q9BW91 350 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 RBFOX1Q9NWB1 397 aaKnown RBP9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 UTRNP46939 3433 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 NINQ8N4C6 2090 aa9.79□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC22A31A6NKX4 558 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 FABP7O15540 132 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 HTR1AP08908 422 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PRPH2P23942 346 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PRKAR1BP31321 381 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PYCR1P32322 319 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 LSSP48449 732 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PDE7AQ13946 482 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ZIC1Q15915 447 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 FAM198BQ6UWH4 519 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PDZD9Q8IXQ8 264 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 BEST4Q8NFU0 473 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 NKD1Q969G9 470 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 OR52D1Q9H346 318 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 QPCTLQ9NXS2 382 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A087WV62 115 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A1W2PRQ8 180 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 NID1P14543 1247 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SPNP16150 400 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 RRAS2P62070 204 aaPredicted RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 STK11Q15831 433 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ISXQ2M1V0 245 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms